RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 ZNF791Q3KP31 576 aaPredicted RBP8.32□□□□□ -1.08
CSMD1-206ENST00000520002 SPANXN4Q5MJ08 99 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 SLCO2A1Q92959 643 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 EPYCQ99645 322 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 EFCAB11Q9BUY7 163 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 SIGLEC1Q9BZZ2 1709 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 SOWAHBA6NEL2 793 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 MMP20O60882 483 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 SC5DO75845 299 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 IFNA5P01569 189 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 PPIGQ13427 754 aaKnown RBP eCLIP8.32□□□□□ -1.08
CSMD1-206ENST00000520002 RSU1Q15404 277 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 GDPD4Q6W3E5 623 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 GPAT4Q86UL3 456 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 PLD6Q8N2A8 252 aaKnown RBP8.32□□□□□ -1.08
CSMD1-206ENST00000520002 OR51B5Q9H339 312 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 GKN1Q9NS71 199 aa8.32□□□□□ -1.08
CSMD1-206ENST00000520002 CAMTA1Q9Y6Y1 1673 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 KCNJ13O60928 360 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 CNTN5O94779 1100 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 MGAT3Q09327 533 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 NTAN1Q96AB6 310 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 ZNF768Q9H5H4 540 aaKnown RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SLC28A3Q9HAS3 691 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SMCHD1A6NHR9 2005 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 RNF13O43567 381 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 AMY2BP19961 511 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 GRB7Q14451 532 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 DNAJA3Q96EY1 480 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 CDKN2AIPNLQ96HQ2 116 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 MKS1Q9NXB0 559 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 WRAP73Q9P2S5 460 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 PCTPQ9UKL6 214 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 PUS1Q9Y606 427 aaKnown RBP eCLIP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 DNAJB5O75953 348 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 OR8U9P0C7N5 309 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 GNRHRP30968 328 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 KCNQ1P51787 676 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 RPS13P62277 151 aaKnown RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SLC22A10Q63ZE4 541 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 NANOGP8Q6NSW7 305 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SLC39A4Q6P5W5 647 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 NRARPQ7Z6K4 114 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SLC38A1Q9H2H9 487 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 NANOGQ9H9S0 305 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 BMP8BP34820 402 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 CLINT1Q14677 625 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SPATS1Q496A3 300 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 BMP8AQ7Z5Y6 402 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 TMPRSS12Q86WS5 348 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 METTL27Q8N6F8 245 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 TSTD1Q8NFU3 115 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 CMTM7Q96FZ5 175 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 TWNKQ96RR1 684 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SMG9Q9H0W8 520 aaKnown RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SMOC2Q9H3U7 446 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 METTL17Q9H7H0 456 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 ZNF701Q9NV72 531 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 PSAT1Q9Y617 370 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 AKAP11Q9UKA4 1901 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 A0A0G2JLL6 359 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 USP2O75604 605 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 MAPK3P27361 379 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 CTHP32929 405 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 STC1P52823 247 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 STEAP3Q658P3 488 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 PRRT2Q7Z6L0 340 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 ZNF454Q8N9F8 522 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SLC35B2Q8TB61 432 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 FZD3Q9NPG1 666 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 ABCC6O95255 1503 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 C9J4A7 227 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 H7C1Q1 480 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 HSPA12AO43301 675 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 MAS1P04201 325 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 FECHP22830 423 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 LRRTM4Q86VH4 590 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 NPAS3Q8IXF0 933 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 CADM3Q8N126 398 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 TRMT10AQ8TBZ6 339 aaKnown RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SMARCD2Q92925 531 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 FUBP3Q96I24 572 aaKnown RBP eCLIP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 TCEAL2Q9H3H9 227 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 IFT22Q9H7X7 185 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 GALPQ9UBC7 116 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 hCG_1807616A0A1W2PRN6 198 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SLC22A5O76082 557 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SUSD1Q6UWL2 747 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 LBX2Q6XYB7 198 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 OR4F6Q8NGB9 312 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 C16orf58Q96GQ5 468 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 ORAI3Q9BRQ5 295 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 DERL2Q9GZP9 239 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SERINC1Q9NRX5 453 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 MYEF2Q9P2K5 600 aaKnown RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 PCDHGB2Q9Y5G2 931 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 EDDM13A0A1B0GTR0 161 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 MEIS3P1A6NDR6 274 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 UPK3BL1B0FP48 263 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms