RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 FRMD1Q8N878 549 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 RLN3Q8WXF3 142 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 KLHL6Q8WZ60 621 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 RGMAQ96B86 450 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 DEPDC7Q96QD5 511 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 MED18Q9BUE0 208 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 GPR174Q9BXC1 333 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 SLC25A19Q9HC21 320 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 ISYNA1Q9NPH2 558 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 CUEDC1Q9NWM3 386 aaPredicted RBP17.28■□□□□ 0.36
SDC2-202ENST00000518385 TBC1D24Q9ULP9 559 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 MGAT4BQ9UQ53 548 aa17.28■□□□□ 0.36
SDC2-202ENST00000518385 RPL36Q9Y3U8 105 aaKnown RBP17.28■□□□□ 0.36
SDC2-202ENST00000518385 TRIOO75962 3097 aa17.27■□□□□ 0.36
SDC2-202ENST00000518385 COL6A3P12111 3177 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 PRAMEF26H0Y7S4 382 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 H7BY64 318 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 ARHGAP33O14559 1287 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 SH3BGRLO75368 114 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 ALX3O95076 343 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 MLLT3P42568 568 aaPredicted RBP17.27■□□□□ 0.35
SDC2-202ENST00000518385 CRYBA2P53672 197 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 TAS2R50P59544 299 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 MLLT11Q13015 90 aaPredicted RBP17.27■□□□□ 0.35
SDC2-202ENST00000518385 SCARB2Q14108 478 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 SF1Q15637 639 aaKnown RBP17.27■□□□□ 0.35
SDC2-202ENST00000518385 ENPP7Q6UWV6 458 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 PTCHD4Q6ZW05 846 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 CLECL1Q8IZS7 167 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 OR8H2Q8N162 312 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 CLIP4Q8N3C7 705 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 LINC00471Q8N535 108 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 ANKRD53Q8N9V6 530 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 PROKR2Q8NFJ6 384 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 OR52E1Q8NGJ3 308 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 OR4A15Q8NGL6 344 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 UTP15Q8TED0 518 aaKnown RBP17.27■□□□□ 0.35
SDC2-202ENST00000518385 ZFPM2Q8WW38 1151 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 TMEM80Q96HE8 168 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 PRAP1Q96NZ9 151 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 PHOX2BQ99453 314 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 DPH2Q9BQC3 489 aaPredicted RBP17.27■□□□□ 0.35
SDC2-202ENST00000518385 ASPNQ9BXN1 380 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 GON7Q9BXV9 100 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 DDX28Q9NUL7 540 aaKnown RBP17.27■□□□□ 0.35
SDC2-202ENST00000518385 QPCTLQ9NXS2 382 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 OR6C2Q9NZP2 312 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 PHF11Q9UIL8 331 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 KCND3Q9UK17 655 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 SSR3Q9UNL2 185 aa17.27■□□□□ 0.35
SDC2-202ENST00000518385 DSPPQ9NZW4 1301 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 YY2O15391 372 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 KLHL18O94889 574 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 GADD45GO95257 159 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 HLA-DMAP28067 261 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 AHRP35869 848 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 CDH12P55289 794 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 PSPHP78330 225 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 SIGLEC14Q08ET2 396 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 HEPACAMQ14CZ8 416 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 PTGES3Q15185 160 aaKnown RBP17.26■□□□□ 0.35
SDC2-202ENST00000518385 MED22Q15528 200 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 SLC25A30Q5SVS4 291 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 FRMPD2BQ6IN97 320 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 FAM160A2Q8N612 972 aaPredicted RBP17.26■□□□□ 0.35
SDC2-202ENST00000518385 CELF2-AS1Q8N7Q2 184 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 TMEM145Q8NBT3 493 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 WDR36Q8NI36 951 aaKnown RBP17.26■□□□□ 0.35
SDC2-202ENST00000518385 OR1E3Q8WZA6 343 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 TTC9Q92623 222 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 ST6GAL2Q96JF0 529 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 TEFMQ96QE5 360 aaKnown RBP17.26■□□□□ 0.35
SDC2-202ENST00000518385 MRPS30Q9NP92 439 aaKnown RBP17.26■□□□□ 0.35
SDC2-202ENST00000518385 PRDM8Q9NQV8 689 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 CA5BQ9Y2D0 317 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 LSM2Q9Y333 95 aaKnown RBP17.26■□□□□ 0.35
SDC2-202ENST00000518385 CAB39Q9Y376 341 aaPredicted RBP17.26■□□□□ 0.35
SDC2-202ENST00000518385 CMAHPQ9Y471 501 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 ZNF451Q9Y4E5 1061 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 PLEKHM1Q9Y4G2 1056 aa17.26■□□□□ 0.35
SDC2-202ENST00000518385 HYKKA2RU49 373 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 H0Y8X5 98 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 K7ESF4 209 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 PLPP1O14494 284 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 OR1F1O43749 312 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 GCM2O75603 506 aaPredicted RBP17.25■□□□□ 0.35
SDC2-202ENST00000518385 PDE9AO76083 593 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 ALPPP05187 535 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 GAAP10253 952 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 ARAFP10398 606 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 DDCP20711 480 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 CMPK1P30085 196 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 BSGP35613 385 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 ILKQ13418 452 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 OCLNQ16625 522 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 METAP1DQ6UB28 335 aaPredicted RBP17.25■□□□□ 0.35
SDC2-202ENST00000518385 NUDT13Q86X67 352 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 PEX5LQ8IYB4 626 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 RDH10Q8IZV5 341 aa17.25■□□□□ 0.35
SDC2-202ENST00000518385 FAM174AQ8TBP5 190 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms