RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 TMEM104Q8NE00 496 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 CHDHQ8NE62 594 aaPredicted RBP3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 SDR9C7Q8NEX9 313 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 STXBP6Q8NFX7 210 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 OR2L3Q8NG85 312 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 OR5AU1Q8NGC0 362 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 OR4A15Q8NGL6 344 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 OR4C15Q8NGM1 316 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 OR13C5Q8NGS8 318 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 SPATA22Q8NHS9 363 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 HCAR2Q8TDS4 363 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 LRRC15Q8TF66 581 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 NRGNQ92686 78 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 SLC25A36Q96CQ1 311 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 MYEOVQ96EZ4 313 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 FAM89AQ96GI7 184 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 LURAP1Q96LR2 239 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 MAP3K3Q99759 626 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 SLC29A1Q99808 456 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 ACBD6Q9BR61 282 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 TMEM246Q9BRR3 403 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 DPH7Q9BTV6 452 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 HINT2Q9BX68 163 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 C1QTNF7Q9BXJ2 289 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 HDHD2Q9H0R4 259 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 OR2AG1Q9H205 316 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 ARRDC1-AS1Q9H2J1 176 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 TMEM165Q9HC07 324 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 DYRK4Q9NR20 520 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZNF275Q9NSD4 429 aaPredicted RBP3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 PSMC3IPQ9P2W1 217 aaPredicted RBP3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 POMT2Q9UKY4 750 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 SLC22A14Q9Y267 594 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 TSC22D4Q9Y3Q8 395 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 SRPRBQ9Y5M8 271 aaKnown RBP3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 PTPRCP08575 1304 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 WDR33Q9C0J8 1336 aaKnown RBP3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 CCDC7Q96M83 1385 aa3.59□□□□□ -1.83
RNU4-60P-201ENST00000517239 TEX13DA0A0J9YY54 714 aaPredicted RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 A0A1W2PRB8 838 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 hDV102S1A0JD36 115 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 MEX3AA1L020 520 aaKnown RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 VGLL3A8MV65 326 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 SMIM22K7EJ46 135 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 PDLIM1O00151 329 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 SH2D1BO14796 132 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 TIMM23O14925 209 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 HCN1O60741 890 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 RNASEH1O60930 286 aaKnown RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 SH3BGRLO75368 114 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 KRT33AO76009 404 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 STK17BO94768 372 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 LCA5LO95447 670 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 APOHP02749 345 aaPredicted RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 MT-ND2P03891 347 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 SERPIND1P05546 499 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 ALOX5P09917 674 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 CCL2P13500 99 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 CD59P13987 128 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 PRF1P14222 555 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 ATP1B2P14415 290 aaPredicted RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 ARSBP15848 533 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 COMTP21964 271 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 GPX3P22352 226 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 GTF2E2P29084 291 aaKnown RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 OXTRP30559 389 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 ETV5P41161 510 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 ATP1B3P54709 279 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLURP1P55000 103 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 GSCP56915 257 aaPredicted RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 RPS4XP62701 263 aaKnown RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 PHEXP78562 749 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 LRRC63Q05C16 580 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 GPR50Q13585 617 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 GK3PQ14409 553 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 MESDQ14696 234 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR1C1Q15619 314 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 KNOP1Q1ED39 458 aaKnown RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 SGSM1Q2NKQ1 1148 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 ACSF3Q4G176 576 aaPredicted RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 PAGE2BQ5JRK9 111 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC22A10Q63ZE4 541 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 Q6ZNX1 250 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 COLCA1Q6ZS62 124 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 RD3Q7Z3Z2 195 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 SCD5Q86SK9 330 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 DCUN1D3Q8IWE4 304 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 GPR65Q8IYL9 337 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 ST13P4Q8IZP2 240 aaPredicted RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 SELENOHQ8IZQ5 122 aaKnown RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 EID3Q8N140 333 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 CENPSQ8N2Z9 138 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 PARP8Q8N3A8 854 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 FGFRL1Q8N441 504 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC44A3Q8N4M1 653 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 RNF10Q8N5U6 811 aaKnown RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 MFSD9Q8NBP5 474 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 NFAM1Q8NET5 270 aaPredicted RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR51L1Q8NGJ5 315 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms