RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 TMEM173Q86WV6 379 aaPredicted RBP12.9□□□□□ -0.34
SH3TC1-225ENST00000515682 OR4F15Q8NGB8 312 aa12.9□□□□□ -0.34
SH3TC1-225ENST00000515682 NEIL2Q969S2 332 aa12.9□□□□□ -0.34
SH3TC1-225ENST00000515682 OR4K3Q96R72 315 aa12.9□□□□□ -0.34
SH3TC1-225ENST00000515682 SAP130Q9H0E3 1048 aa12.9□□□□□ -0.34
SH3TC1-225ENST00000515682 PDFQ9HBH1 243 aa12.9□□□□□ -0.34
SH3TC1-225ENST00000515682 EXOSC1Q9Y3B2 195 aaKnown RBP12.9□□□□□ -0.34
SH3TC1-225ENST00000515682 COL11A1P12107 1806 aaPredicted RBP12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 C8orf89P0DMQ9 161 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 DDCP20711 480 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 ACVR1BP36896 505 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 DSG2Q14126 1118 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 IKBIPQ70UQ0 350 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 RBM45Q8IUH3 476 aaKnown RBP12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 C10orf53Q8N6V4 93 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 C16orf78Q8WTQ4 265 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 ASB11Q8WXH4 323 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 CDCA4Q9BXL8 241 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 BTBD1Q9H0C5 482 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 STOX2Q9P2F5 926 aaPredicted RBP12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 C1QBP02746 253 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 NCBP2P52298 156 aaKnown RBP eCLIP12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 ERVK-21P61565 698 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 BTN1A1Q13410 526 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 P2RY14Q15391 338 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 SLC25A25Q6KCM7 469 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 TCEAL8Q8IYN2 117 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 IRF7Q92985 503 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 FATE1Q969F0 183 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 SLC25A46Q96AG3 418 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 LINC00597Q9H2U6 94 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 NIPAL2Q9H841 368 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 ASIC5Q9NY37 505 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 LHX3Q9UBR4 397 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 ZNF69Q9UC07 566 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 FBXW2Q9UKT8 454 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 FXYD6-FXYD2A0A087WZ82 144 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 GPR37L1O60883 481 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 ARHGEF15O94989 841 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 PRKACAP17612 351 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 UQCRC2P22695 453 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 PKLRP30613 574 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 PDGFRLQ15198 375 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 ARSIQ5FYB1 569 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 PLEKHS1Q5SXH7 462 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 TMEM145Q8NBT3 493 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 TM9SF4Q92544 642 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 TIFAQ96CG3 184 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 MCCC1Q96RQ3 725 aaPredicted RBP12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 AIF1LQ9BQI0 150 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 FXYD6Q9H0Q3 95 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 KLHL21Q9UJP4 597 aa12.89□□□□□ -0.35
SH3TC1-225ENST00000515682 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 LRRTM2O43300 516 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 RPN2P04844 631 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 TRAPPC2P0DI81 140 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 TRAPPC2BP0DI82 140 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 RFX2P48378 723 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 RNF144AP50876 292 aaPredicted RBP12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 SP140Q13342 867 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 SLC8B1Q6J4K2 584 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 CREB3L2Q70SY1 520 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 ANKK1Q8NFD2 765 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 THAP7Q9BT49 309 aaPredicted RBP12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 FAIM2Q9BWQ8 316 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 RHBGQ9H310 441 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 CDCP1Q9H5V8 836 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 CACNA1CQ13936 2221 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 RNASET2O00584 256 aaKnown RBP12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 PROM1O43490 865 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 CTSEP14091 401 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 GPR4P46093 362 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 CSNK1DP48730 415 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 AKIRIN2Q53H80 203 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 ZNF655Q8N720 491 aaPredicted RBP12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 OR5D16Q8NGK9 328 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 KCNN3Q9UGI6 736 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 POM121CA8CG34 1229 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 H7C0S8 307 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 SMAD9O15198 467 aaKnown RBP12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 PRKYO43930 277 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 KELP23276 732 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 ETV6P41212 452 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 GIPRP48546 466 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 GALEQ14376 348 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 TOR2AQ5JU69 321 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 MTSS1LQ765P7 747 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 RPLP0P6Q8NHW5 317 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 WFIKKN2Q8TEU8 576 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 COQ10AQ96MF6 247 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 OR51J1Q9H342 316 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 EGLN3Q9H6Z9 239 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 CSNK1G3Q9Y6M4 447 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 URB1O60287 2271 aaKnown RBP12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 SLC19A2O60779 497 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 PLATP00750 562 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 EPCAMP16422 314 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 CR2P20023 1033 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 GSTM3P21266 225 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 CD9P21926 228 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms