RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PLGLB1Q02325 96 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 DUSP8Q13202 625 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 EXOSC7Q15024 291 aaKnown RBP11.76□□□□□ -0.53
CLCN3-210ENST00000515420 RFTN2Q52LD8 501 aaPredicted RBP11.76□□□□□ -0.53
CLCN3-210ENST00000515420 C1QL3Q5VWW1 255 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 FAM180BQ6P0A1 224 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 ARHGAP11AQ6P4F7 1023 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 CHERPQ8IWX8 916 aaKnown RBP11.76□□□□□ -0.53
CLCN3-210ENST00000515420 DDIASQ8IXT1 998 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 FAM109AQ8N4B1 249 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 OR10G3Q8NGC4 313 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 OR52R1Q8NGF1 315 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 OR9A2Q8NGT5 310 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 CDC26Q8NHZ8 85 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 PPP1R14CQ8TAE6 165 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 MTERF3Q96E29 417 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 BTBD9Q96Q07 612 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 ITPAQ9BY32 194 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 NXF5Q9H1B4 397 aaKnown RBP11.76□□□□□ -0.53
CLCN3-210ENST00000515420 QPCTLQ9NXS2 382 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 TAS2R9Q9NYW1 312 aa11.76□□□□□ -0.53
CLCN3-210ENST00000515420 SUCOQ9UBS9 1254 aaKnown RBP11.76□□□□□ -0.53
CLCN3-210ENST00000515420 CNOT11Q9UKZ1 510 aaKnown RBP11.76□□□□□ -0.53
CLCN3-210ENST00000515420 BOKQ9UMX3 212 aaPredicted RBP11.76□□□□□ -0.53
CLCN3-210ENST00000515420 EXO1Q9UQ84 846 aaKnown RBP11.76□□□□□ -0.53
CLCN3-210ENST00000515420 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.76□□□□□ -0.53
CLCN3-210ENST00000515420 NCOA6Q14686 2063 aaPredicted RBP11.75□□□□□ -0.53
CLCN3-210ENST00000515420 A0A0G2JMM0 328 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 A0A1W2PPB8 328 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 A0A1W2PRS3 328 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 PINLYPA6NC86 204 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 KIR3DP1A8MWS1 328 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 COQ9O75208 318 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 PPM1BO75688 479 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 SNX4O95219 450 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 HSPA4LO95757 839 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 RNF224P0DH78 156 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 TACR1P25103 407 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 PTGER1P34995 402 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 RPL3P39023 403 aaKnown RBP11.75□□□□□ -0.53
CLCN3-210ENST00000515420 RFC3P40938 356 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 DNASE1L1P49184 302 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 NCBP2P52298 156 aaKnown RBP eCLIP11.75□□□□□ -0.53
CLCN3-210ENST00000515420 KCNJ2P63252 427 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 PDE7AQ13946 482 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 CHI3L2Q15782 390 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 SMU1Q2TAY7 513 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 ATP6AP1LQ52LC2 224 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 LCE2DQ5TA82 110 aaPredicted RBP11.75□□□□□ -0.53
CLCN3-210ENST00000515420 FJX1Q86VR8 437 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 SLC34A3Q8N130 599 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 OR52N2Q8NGI0 321 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 SPPL2AQ8TCT8 520 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 PKNOX2Q96KN3 472 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 EGLN2Q96KS0 407 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 VSTM2LQ96N03 204 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 REEP4Q9H6H4 257 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 PROK2Q9HC23 129 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 TUBA8Q9NY65 449 aaPredicted RBP11.75□□□□□ -0.53
CLCN3-210ENST00000515420 ZDHHC2Q9UIJ5 367 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 HAO1Q9UJM8 370 aa11.75□□□□□ -0.53
CLCN3-210ENST00000515420 C19orf53Q9UNZ5 99 aaPredicted RBP11.75□□□□□ -0.53
CLCN3-210ENST00000515420 GPR55Q9Y2T6 319 aaPredicted RBP11.75□□□□□ -0.53
CLCN3-210ENST00000515420 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.75□□□□□ -0.53
CLCN3-210ENST00000515420 A0A1B0GVC2 190 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 OR14I1A6ND48 311 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 TTC36A6NLP5 189 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 CCL21O00585 134 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 PRRG2O14669 202 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 PDPK1O15530 556 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 SUSD5O60279 629 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 ERN1O75460 977 aaKnown RBP11.74□□□□□ -0.53
CLCN3-210ENST00000515420 PSMG1O95456 288 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 JUNP05412 331 aaKnown RBP11.74□□□□□ -0.53
CLCN3-210ENST00000515420 ABCB1P08183 1280 aaPredicted RBP11.74□□□□□ -0.53
CLCN3-210ENST00000515420 BCKDHAP12694 445 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 PIGAP37287 484 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 FRKP42685 505 aaPredicted RBP11.74□□□□□ -0.53
CLCN3-210ENST00000515420 FBXW4P57775 412 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 ABCE1P61221 599 aaKnown RBP11.74□□□□□ -0.53
CLCN3-210ENST00000515420 PLCXD2Q0VAA5 305 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 MAD2L1Q13257 205 aaPredicted RBP11.74□□□□□ -0.53
CLCN3-210ENST00000515420 SNTA1Q13424 505 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 MPP2Q14168 576 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 C3AR1Q16581 482 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 GALNTL6Q49A17 601 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 PRAMEF20Q5VT98 475 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 RPTNQ6XPR3 784 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 NUP54Q7Z3B4 507 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 R3HCC1LQ7Z5L2 792 aaKnown RBP11.74□□□□□ -0.53
CLCN3-210ENST00000515420 OR2L13Q8N349 312 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 TMEM251Q8N6I4 163 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 SIMC1Q8NDZ2 872 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 OR7G2Q8NG99 324 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 ZFP28Q8NHY6 868 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 FAM57AQ8TBR7 257 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 AGR3Q8TD06 166 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 PHF10Q8WUB8 498 aaKnown RBP11.74□□□□□ -0.53
CLCN3-210ENST00000515420 DIO2Q92813 273 aa11.74□□□□□ -0.53
CLCN3-210ENST00000515420 KAT2AQ92830 837 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms