RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 RNF4P78317 190 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 VAC14Q08AM6 782 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 CHAF1BQ13112 559 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 MYBPC3Q14896 1274 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 EBPQ15125 230 aaKnown RBP19.48■□□□□ 0.71
LSM6-207ENST00000515311 MFSD12Q6NUT3 480 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 ZCCHC12Q6PEW1 402 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 HACD2Q6Y1H2 254 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 C6orf120Q7Z4R8 191 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 MSRB3Q8IXL7 192 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 C9orf40Q8IXQ3 194 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 KIF2BQ8N4N8 673 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 ZFP90Q8TF47 636 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 SNRNP27Q8WVK2 155 aaKnown RBP19.48■□□□□ 0.71
LSM6-207ENST00000515311 HOXB13Q92826 284 aaPredicted RBP19.48■□□□□ 0.71
LSM6-207ENST00000515311 LRRC58Q96CX6 371 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 GIMAP5Q96F15 307 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 VSTM2LQ96N03 204 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 CGREF1Q99674 301 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 VAPAQ9P0L0 249 aa19.48■□□□□ 0.71
LSM6-207ENST00000515311 CFAP47Q6ZTR5 3102 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 TTC36A6NLP5 189 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 FXYD1O00168 92 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 UBOX5O94941 541 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 CELA2AP08217 269 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 KRT16P08779 473 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 CALB2P22676 271 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 PRIM2P49643 509 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 NUDT2P50583 147 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 PRKAG1P54619 331 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 DEFB109BQ30KR1 87 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 GTDC1Q4AE62 458 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 APLFQ8IW19 511 aaPredicted RBP19.47■□□□□ 0.71
LSM6-207ENST00000515311 CLEC4FQ8N1N0 589 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 ARMC10Q8N2F6 343 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 CDRT4Q8N9R6 151 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 C17orf47Q8NEP4 570 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 OR5L2Q8NGL0 311 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 NUBPLQ8TB37 319 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 DEFB126Q9BYW3 111 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 WWTR1Q9GZV5 400 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 ING2Q9H160 280 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 TPT1P8Q9HAU6 139 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 IL1RL2Q9HB29 575 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 FOLH1BQ9HBA9 442 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 CPNE5Q9HCH3 593 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.47■□□□□ 0.71
LSM6-207ENST00000515311 DOCK10Q96BY6 2186 aa19.47■□□□□ 0.71
LSM6-207ENST00000515311 C2orf92A0A1B0GVN3 265 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 MASP2O00187 686 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 CLIC1O00299 241 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 T-ENOLP0DO92 83 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 ITGAMP11215 1152 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 DCAF7P61962 342 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 TXNL4AP83876 142 aaKnown RBP19.46■□□□□ 0.71
LSM6-207ENST00000515311 ZNF155Q12901 538 aaPredicted RBP19.46■□□□□ 0.71
LSM6-207ENST00000515311 ART3Q13508 389 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 EXOSC6Q5RKV6 272 aaKnown RBP19.46■□□□□ 0.71
LSM6-207ENST00000515311 H3F3CQ6NXT2 135 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 AMER2Q8N7J2 671 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 MIPOL1Q8TD10 442 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 AURKBQ96GD4 344 aaPredicted RBP19.46■□□□□ 0.71
LSM6-207ENST00000515311 SLC35G5Q96KT7 338 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 ANKRD27Q96NW4 1050 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 BTBD9Q96Q07 612 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 LMF2Q9BU23 707 aaKnown RBP19.46■□□□□ 0.71
LSM6-207ENST00000515311 ACTRT3Q9BYD9 372 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 LHPPQ9H008 270 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 EQTNQ9NQ60 294 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 FAF1Q9UNN5 650 aaPredicted RBP19.46■□□□□ 0.71
LSM6-207ENST00000515311 CORO2BQ9UQ03 480 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 DTX4Q9Y2E6 619 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 KCNMB2Q9Y691 235 aa19.46■□□□□ 0.71
LSM6-207ENST00000515311 ACACBO00763 2458 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 PTPRQQ9UMZ3 2332 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 MED13Q9UHV7 2174 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 SOX30O94993 753 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 MAP3K8P41279 467 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 PPICP45877 212 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 CPA2P48052 419 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 PSPHP78330 225 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 LASP1Q14847 261 aaKnown RBP19.45■□□□□ 0.7
LSM6-207ENST00000515311 ZNHIT3Q15649 155 aaPredicted RBP19.45■□□□□ 0.7
LSM6-207ENST00000515311 RUNDC3AQ59EK9 446 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 HLA-DQA1Q5Y7H0 255 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 CDC73Q6P1J9 531 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 C8orf82Q6P1X6 216 aaPredicted RBP19.45■□□□□ 0.7
LSM6-207ENST00000515311 LGI4Q8N135 537 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 GALNT16Q8N428 558 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 SLC5A8Q8N695 610 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 ZNF441Q8N8Z8 693 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 ADIPOR1Q96A54 375 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 TP53INP1Q96A56 240 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 THOC3Q96J01 351 aaKnown RBP19.45■□□□□ 0.7
LSM6-207ENST00000515311 CPPED1Q9BRF8 314 aaPredicted RBP19.45■□□□□ 0.7
LSM6-207ENST00000515311 ITPAQ9BY32 194 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 RAD21L1Q9H4I0 556 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 RYDENQ9NUL5 291 aaKnown RBP19.45■□□□□ 0.7
LSM6-207ENST00000515311 GIN1Q9NXP7 522 aa19.45■□□□□ 0.7
LSM6-207ENST00000515311 GPR55Q9Y2T6 319 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms