RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	PSMA5	P28066	241 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RPL9	P32969	192 aa	Known RBP	2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	TIMP3	P35625	211 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	GBX2	P52951	348 aa	Predicted RBP	2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	CRYBA2	P53672	197 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	HERVK_113	P63132	956 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ERVK-8	P63133	956 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	KLF5	Q13887	457 aa	Predicted RBP	2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	GCKR	Q14397	625 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	P2RY14	Q15391	338 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	CLPP	Q16740	277 aa	Predicted RBP	2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	TPD52L1	Q16890	204 aa	Predicted RBP	2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	PARP6	Q2NL67	630 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ANKRD55	Q3KP44	614 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	TMEM30B	Q3MIR4	351 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	DCAF4L1	Q3SXM0	396 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	POM121L1P	Q3SYA9	428 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ZNF311	Q5JNZ3	666 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RHBDD2	Q6NTF9	364 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	NIPAL3	Q6P499	406 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	DPY19L2P2	Q6ZN68	376 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RGS9BP	Q6ZS82	235 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ZER1	Q7Z7L7	766 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	HOGA1	Q86XE5	327 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	APLF	Q8IW19	511 aa	Predicted RBP	2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	OR4N5	Q8IXE1	308 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	GCNT2	Q8N0V5	402 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	DCLK2	Q8N568	766 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ADAD2	Q8NCV1	583 aa	Known RBP	2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ZNF397	Q8NF99	534 aa	Predicted RBP	2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	OR9Q2	Q8NGE9	314 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	TMEM190	Q8WZ59	177 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SLCO2A1	Q92959	643 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	PNPLA2	Q96AD5	504 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	COG3	Q96JB2	828 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	KRT12	Q99456	494 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ERP44	Q9BS26	406 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ERVK-6	Q9BXR3	956 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RAB33B	Q9H082	229 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	NMUR1	Q9HB89	426 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	YAE1D1	Q9NRH1	226 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	TEX10	Q9NXF1	929 aa	Predicted RBP	2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	P2RX2	Q9UBL9	471 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	KLK11	Q9UBX7	282 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	TUBGCP4	Q9UGJ1	667 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ZNF175	Q9Y473	711 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ATG4B	Q9Y4P1	393 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	IFT172	Q9UG01	1749 aa		2.93	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	MYOM1	P52179	1685 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ZC3H13	Q5T200	1668 aa	Known RBP	2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	GLI2	P10070	1586 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	NRXN1	Q9ULB1	1477 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	NSD2	O96028	1365 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ANKRD36B	Q8N2N9	1353 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SH3PXD2B	A1X283	911 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RNF222	A6NCQ9	220 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	TRIM64C	A6NLI5	447 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	PMS2P5	A8MQ11	134 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267		H3BTX0	84 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SH2D1B	O14796	132 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	INPP4B	O15327	924 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	CFLAR	O15519	480 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	B4GAT1	O43505	415 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	GMFG	O60234	142 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	STK17B	O94768	372 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	OR4F21	O95013	312 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RPLP0	P05388	317 aa	Known RBP	2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ASNS	P08243	561 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	GSTA1	P08263	222 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ZCCHC18	P0CG32	403 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	EPB41	P11171	864 aa	Known RBP	2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	HNRNPA2B1	P22626	353 aa	Known RBP	2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	PTPN4	P29074	926 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	MAT2A	P31153	395 aa	Known RBP	2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	NAPA	P54920	295 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RIPK4	P57078	832 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ERVK-16	P61578	105 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	BTG1	P62324	171 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	PPIA	P62937	165 aa	Known RBP	2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	CYCS	P99999	105 aa	Known RBP	2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	LRRC74A	Q0VAA2	488 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	GPM6B	Q13491	265 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SGSM1	Q2NKQ1	1148 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	NADK2	Q4G0N4	442 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	CEP55	Q53EZ4	464 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	FAM53A	Q6NSI3	398 aa	Predicted RBP	2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SLC39A4	Q6P5W5	647 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	TRIM65	Q6PJ69	517 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	CASC1	Q6TDU7	716 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ZNF730	Q6ZMV8	503 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	GPBP1	Q86WP2	473 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	FAM131B	Q86XD5	332 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	CBWD2	Q8IUF1	395 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	WDR49	Q8IV35	697 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	LINC00518	Q8N0U6	118 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ICA1L	Q8NDH6	482 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	OR52M1	Q8NGK5	317 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	OR2T34	Q8NGX1	318 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RPLP0P6	Q8NHW5	317 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	WDR36	Q8NI36	951 aa	Known RBP	2.92	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms