RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	FAM72A	Q5TYM5	149 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	FAM72D	Q6L9T8	149 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ZNF562	Q6V9R5	426 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006		Q7L0L9	218 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	FAM72B	Q86X60	149 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	OR5AU1	Q8NGC0	362 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	OR1K1	Q8NGR3	316 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	OR4F5	Q8NH21	305 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	RAET1E	Q8TD07	263 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	MRGPRD	Q8TDS7	321 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	SLCO2A1	Q92959	643 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	TUBGCP3	Q96CW5	907 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CASD1	Q96PB1	797 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PSKH2	Q96QS6	385 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ZNF300	Q96RE9	604 aa	Predicted RBP	4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ZBTB18	Q99592	522 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	OVOL2	Q9BRP0	275 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	WAC	Q9BTA9	647 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ANP32E	Q9BTT0	268 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	EDEM2	Q9BV94	578 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	DGCR6L	Q9BY27	220 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	DHX33	Q9H6R0	707 aa	Known RBP	4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	B3GAT2	Q9NPZ5	323 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	C2orf42	Q9NWW7	574 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	KLRF1	Q9NZS2	232 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	RNF14	Q9UBS8	474 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	GHRL	Q9UBU3	117 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CTNNA3	Q9UI47	895 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	KCNG2	Q9UJ96	466 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PURG	Q9UJV8	347 aa	Known RBP	4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PTCH1	Q13635	1447 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CCDC7	Q96M83	1385 aa		4.26	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	FER1L5	A0AVI2	2057 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006		A0A0A6YYD4	124 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	GSAP	A4D1B5	854 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ASB14	A6NK59	587 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006		K7EQD1	137 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	IMPA2	O14732	288 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	DCX	O43602	365 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	AOC1	P19801	751 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CALB2	P22676	271 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	MMP12	P39900	470 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ERVK-16	P61578	105 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	RPS27A	P62979	156 aa	Known RBP	4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	RPL36A	P83881	106 aa	Known RBP	4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	BNIP1	Q12981	228 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	FHL1	Q13642	323 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PDK3	Q15120	406 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	MLF2	Q15773	248 aa	Predicted RBP	4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ECSCR	Q19T08	205 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	LINC01620	Q4KN68	170 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	FAM76B	Q5HYJ3	339 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PWWP2B	Q6NUJ5	590 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	LEG1	Q6P5S2	330 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ZNF841	Q6ZN19	808 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	LUZP1	Q86V48	1076 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	OR10G7	Q8NGN6	311 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	OR13C2	Q8NGS9	318 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PCNP	Q8WW12	178 aa	Known RBP	4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CNRIP1	Q96F85	164 aa	Predicted RBP	4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	AKR1E2	Q96JD6	320 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	USP28	Q96RU2	1077 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	SECISBP2	Q96T21	854 aa	Known RBP	4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CAPS2	Q9BXY5	557 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	VPS33B	Q9H267	617 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	MED20	Q9H944	212 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006		Q9HAA7	133 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	SPHK2	Q9NRA0	654 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	FAM114A2	Q9NRY5	505 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ZNF346	Q9UL40	294 aa	Known RBP	4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	RNF6	Q9Y252	685 aa		4.25	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	IGKV2D-30	A0A075B6S6	120 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	LOC105371242	A0A075B767	164 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	NPIPA5	A0A0B4J1W7	369 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PPIAL4C	A0A0B4J2A2	164 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	LRIT2	A6NDA9	550 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	FBLL1	A6NHQ2	334 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ZNF724	A8MTY0	619 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	NPIPA5	E9PKD4	350 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	TSC22D2	O75157	780 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	SURF6	O75683	361 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ADCY5	O95622	1261 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CLDN1	O95832	211 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PATE4	P0C8F1	98 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PPIAL4G	P0DN37	164 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CD1D	P15813	335 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	GNB3	P16520	340 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PDHA2	P29803	388 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PPT1	P50897	306 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	NDST2	P52849	883 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CYCS	P99999	105 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PJVK	Q0ZLH3	352 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	DDX39B	Q13838	428 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	TFDP1	Q14186	410 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	EMC2	Q15006	297 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	KNOP1	Q1ED39	458 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	UNC50	Q53HI1	259 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms