RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 GLOD5A6NK44 160 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 TNFRSF11BO00300 401 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 CASC3O15234 703 aaKnown RBP12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 PRAMEF10O60809 474 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 PRKRAO75569 313 aaKnown RBP12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 SOX30O94993 753 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 OPN1SWP03999 348 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 NR2F1P10589 423 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 CDH3P22223 829 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 RRM2P31350 389 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 KCNJ5P48544 419 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 HLCSP50747 726 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 DAPP51397 102 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 CASP9P55211 416 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 TPD52P55327 224 aaPredicted RBP12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 SH3BGRP55822 239 aaPredicted RBP12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 SMIM11AP58511 58 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 GABARAPL2P60520 117 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 RUNX2Q13950 521 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 ZIK1Q3SY52 487 aaPredicted RBP12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 DEFB134Q4QY38 66 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 C4orf17Q53FE4 359 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 RNF220Q5VTB9 566 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 FAM180BQ6P0A1 224 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 CYP4Z1Q86W10 505 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 CCDC116Q8IYX3 515 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 OR4N4Q8N0Y3 316 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 DNAJC22Q8N4W6 341 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 ZCCHC10Q8TBK6 192 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 GIPC3Q8TF64 312 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 FBLIM1Q8WUP2 373 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 NR4A3Q92570 626 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 FKBP10Q96AY3 582 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 ZNF354BQ96LW1 612 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 ZNF285Q96NJ3 590 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 MUS81Q96NY9 551 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 MS4A4EQ96PG1 132 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 TRNT1Q96Q11 434 aaKnown RBP12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 SLC38A3Q99624 504 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 PITX2Q99697 317 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 TREX2Q9BQ50 279 aaPredicted RBP12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 GABARAPL3Q9BY60 117 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 ACTRT3Q9BYD9 372 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 TRIM45Q9H8W5 580 aaPredicted RBP12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 ENAMQ9NRM1 1142 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 KIF17Q9P2E2 1029 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 TRPC4Q9UBN4 977 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 IL17BQ9UHF5 180 aa12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 ARHGEF17Q96PE2 2063 aaPredicted RBP12.31□□□□□ -0.44
DEPDC1B-206ENST00000512452 A0A087WV62 115 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 E9PQ18 207 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 BCKDKO14874 412 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 HMGN2P05204 90 aaKnown RBP12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 FESP07332 822 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 OR12D1P0DN82 309 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 PVRP15151 417 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 ATP6V1B1P15313 513 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 PORP16435 677 aaPredicted RBP12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 PRKACGP22612 351 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 TTKP33981 857 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 FEN1P39748 380 aaKnown RBP12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 LIMS1P48059 325 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 MAN2A2P49641 1150 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 XKP51811 444 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 AFF3P51826 1226 aaKnown RBP12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 EMP3P54852 163 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 MAZP56270 477 aaKnown RBP12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 C21orf59P57076 290 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 RAB38P57729 211 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 RPS26P62854 115 aaKnown RBP12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 NDUFA9Q16795 377 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 PRTGQ2VWP7 1150 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 C14orf28Q4W4Y0 310 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 ATAD3BQ5T9A4 648 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 GARNL3Q5VVW2 1013 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 ZCCHC12Q6PEW1 402 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 TMEM107Q6UX40 140 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 FAM92BQ6ZTR7 304 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 MCATQ8IVS2 390 aaKnown RBP12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 ALDH16A1Q8IZ83 802 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 OFCC1Q8IZS5 231 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 OR2L13Q8N349 312 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 ARHGEF39Q8N4T4 335 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 ATG16L2Q8NAA4 619 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 NUP43Q8NFH3 380 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 XAGE5Q8WWM1 108 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 RAB8BQ92930 207 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 ZNF566Q969W8 418 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 DGCR14Q96DF8 476 aaKnown RBP12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 DHRS1Q96LJ7 313 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 APOL4Q9BPW4 351 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 GRIP2Q9C0E4 1043 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 IL21RQ9HBE5 538 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 KRT84Q9NSB2 600 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 POFUT2Q9Y2G5 429 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 NOTCH2Q04721 2471 aa12.3□□□□□ -0.44
DEPDC1B-206ENST00000512452 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.29□□□□□ -0.44
DEPDC1B-206ENST00000512452 TLCD2A6NGC4 264 aa12.29□□□□□ -0.44
DEPDC1B-206ENST00000512452 SYT5O00445 386 aa12.29□□□□□ -0.44
DEPDC1B-206ENST00000512452 CYR61O00622 381 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms