RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 FAM111AQ96PZ2 611 aa11.09□□□□□ -0.63
DDR1-267ENST00000512336 PAFAH2Q99487 392 aa11.09□□□□□ -0.63
DDR1-267ENST00000512336 G6PC3Q9BUM1 346 aa11.09□□□□□ -0.63
DDR1-267ENST00000512336 ZNF701Q9NV72 531 aaPredicted RBP11.09□□□□□ -0.63
DDR1-267ENST00000512336 SLC17A6Q9P2U8 582 aa11.09□□□□□ -0.63
DDR1-267ENST00000512336 CLCF1Q9UBD9 225 aa11.09□□□□□ -0.63
DDR1-267ENST00000512336 TBK1Q9UHD2 729 aa11.09□□□□□ -0.63
DDR1-267ENST00000512336 CHMP2BQ9UQN3 213 aa11.09□□□□□ -0.63
DDR1-267ENST00000512336 SPACA6W5XKT8 324 aa11.09□□□□□ -0.63
DDR1-267ENST00000512336 A0A1W2PNV4 684 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 CAPN14A8MX76 684 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 HAX1O00165 279 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 MSTNO14793 375 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 PRAMEF4O60810 478 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 SMNDC1O75940 238 aaKnown RBP eCLIP11.08□□□□□ -0.64
DDR1-267ENST00000512336 CLPSP04118 112 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 TP53P04637 393 aaPredicted RBP11.08□□□□□ -0.64
DDR1-267ENST00000512336 VIMP08670 466 aaKnown RBP11.08□□□□□ -0.64
DDR1-267ENST00000512336 DRD4P21917 467 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 PTPN6P29350 595 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 SSTR1P30872 391 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 CD79BP40259 229 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 CASP3P42574 277 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 SLC6A12P48065 614 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 SLC37A1P57057 533 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 GAB1Q13480 694 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 VEZF1Q14119 521 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 ZNF267Q14586 743 aaPredicted RBP11.08□□□□□ -0.64
DDR1-267ENST00000512336 CRYMQ14894 314 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 PRAMEF9Q5VWM5 478 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 TIGD3Q6B0B8 471 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 ZC3HAV1LQ96H79 300 aaKnown RBP11.08□□□□□ -0.64
DDR1-267ENST00000512336 PDLIM5Q96HC4 596 aaKnown RBP11.08□□□□□ -0.64
DDR1-267ENST00000512336 TMEM41AQ96HV5 264 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 UCN2Q96RP3 112 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 ROGDIQ9GZN7 287 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 CXorf56Q9H5V9 222 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 YAE1D1Q9NRH1 226 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 RYDENQ9NUL5 291 aaKnown RBP11.08□□□□□ -0.64
DDR1-267ENST00000512336 ZNF490Q9ULM2 529 aaPredicted RBP11.08□□□□□ -0.64
DDR1-267ENST00000512336 RRP15Q9Y3B9 282 aaKnown RBP11.08□□□□□ -0.64
DDR1-267ENST00000512336 MED12Q93074 2177 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 USF3Q68DE3 2245 aa11.08□□□□□ -0.64
DDR1-267ENST00000512336 TCRBV9S1A1TA0A576 114 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 TLX2O43763 284 aaPredicted RBP11.07□□□□□ -0.64
DDR1-267ENST00000512336 SH3BGRLO75368 114 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 PRKRAO75569 313 aaKnown RBP11.07□□□□□ -0.64
DDR1-267ENST00000512336 SNRPAP09012 282 aaKnown RBP11.07□□□□□ -0.64
DDR1-267ENST00000512336 ALOX15P16050 662 aaPredicted RBP11.07□□□□□ -0.64
DDR1-267ENST00000512336 HIST1H1TP22492 207 aaPredicted RBP11.07□□□□□ -0.64
DDR1-267ENST00000512336 GCAP28676 217 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 GCKP35557 465 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 HNMTP50135 292 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 EEF1A1P68104 462 aaKnown RBP11.07□□□□□ -0.64
DDR1-267ENST00000512336 CDKL1Q00532 357 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 CLEC12BQ2HXU8 276 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 SPRED3Q2MJR0 410 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 MSS51Q4VC12 460 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 EEF1A1P5Q5VTE0 462 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 HHATQ5VTY9 493 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 VWA1Q6PCB0 445 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 ZNF474Q6S9Z5 364 aaPredicted RBP11.07□□□□□ -0.64
DDR1-267ENST00000512336 ANGPTL8Q6UXH0 198 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 CCDC121Q6ZUS5 278 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 GRAMD2AQ8IUY3 354 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 TRIM42Q8IWZ5 723 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 ST13P4Q8IZP2 240 aaPredicted RBP11.07□□□□□ -0.64
DDR1-267ENST00000512336 GBP7Q8N8V2 638 aaPredicted RBP11.07□□□□□ -0.64
DDR1-267ENST00000512336 ANKRD42Q8N9B4 389 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 C7orf57Q8NEG2 295 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 OR1J4Q8NGS1 313 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 STARD4Q96DR4 205 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 TBCDQ9BTW9 1192 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 PITHD1Q9GZP4 211 aaPredicted RBP11.07□□□□□ -0.64
DDR1-267ENST00000512336 RPF2Q9H7B2 306 aaKnown RBP11.07□□□□□ -0.64
DDR1-267ENST00000512336 SNX15Q9NRS6 342 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 CTNNAL1Q9UBT7 734 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 VWA7Q9Y334 891 aa11.07□□□□□ -0.64
DDR1-267ENST00000512336 C2orf92A0A1B0GVN3 265 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 OR6C76A6NM76 312 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 PLOD2O00469 737 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 CD5LO43866 347 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 OR10H2O60403 315 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 SCELO95171 688 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 TGM6O95932 706 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 PGAM1P18669 254 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 CD22P20273 847 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 UGT2B10P36537 528 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 SSR2P43308 183 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 PCYT1AP49585 367 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 STARP49675 285 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 CORO7P57737 925 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 PCDH1Q08174 1060 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 FRG1Q14331 258 aaKnown RBP11.06□□□□□ -0.64
DDR1-267ENST00000512336 KRTAP24-1Q3LI83 254 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 KBTBD12Q3ZCT8 623 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 CHRFAM7AQ494W8 412 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 UBAP2Q5T6F2 1119 aaKnown RBP11.06□□□□□ -0.64
DDR1-267ENST00000512336 STEAP4Q687X5 459 aa11.06□□□□□ -0.64
DDR1-267ENST00000512336 C18orf63Q68DL7 685 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms