RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 PLXNA4Q9HCM2 1894 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 KIAA1671Q9BY89 1806 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 CUL9Q8IWT3 2517 aa4.74□□□□□ -1.65
TRAPPC11-208ENST00000511955 TTC28Q96AY4 2481 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 WDR87Q6ZQQ6 2873 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 A0A0U1RRA0 63 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 MGAT4DA6NG13 374 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 RNF223E7ERA6 249 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 C5orf67F2Z3F1 127 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 TRAFD1O14545 582 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 CYB561D2O14569 222 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 PFDN6O15212 129 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR4F21O95013 312 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 NXPH2O95156 264 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 KRT75O95678 551 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 HBQ1P09105 142 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 CTSAP10619 480 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 PIM1P11309 404 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNF28P17035 718 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 CD58P19256 250 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 UQCRC2P22695 453 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 DDX6P26196 483 aaKnown RBP eCLIP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 MAOBP27338 520 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLC6A4P31645 630 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 HNRNPH3P31942 346 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR1D2P34982 312 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 MAP3K8P41279 467 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 GLUD2P49448 558 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 NDUFV1P49821 464 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 TAF6P49848 677 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 RASSF2P50749 326 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 RAB9AP51151 201 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR2B6P58173 313 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 NCALDP61601 193 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ECT2LQ008S8 904 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 RELBQ01201 579 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 CKAP4Q07065 602 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 DLX2Q07687 328 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLAMF1Q13291 335 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 KCNMB1Q16558 191 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 EDRF1Q3B7T1 1238 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 XKR7Q5GH72 579 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 GPR107Q5VW38 600 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 LIPJQ5W064 366 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 TMEM198Q66K66 360 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ABLIM2Q6H8Q1 611 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 RNASEKQ6P5S7 137 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 FIGLAQ6QHK4 219 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 CFAP77Q6ZQR2 320 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 SV2AQ7L0J3 742 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 C16orf62Q7Z3J2 963 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 SNX20Q7Z614 316 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNF546Q86UE3 836 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ITIH5Q86UX2 942 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZFP82Q8N141 532 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 C12orf76Q8N812 135 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 HJURPQ8NCD3 748 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 FAM71CQ8NEG0 241 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 STXBP6Q8NFX7 210 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 C9orf43Q8TAL5 461 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 HPS1Q92902 700 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 S100PBPQ96BU1 408 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 FBXO17Q96EF6 278 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 RNF145Q96MT1 663 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR2A14Q96R47 310 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 FEM1AQ9BSK4 669 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 CNOT8Q9UFF9 292 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 RWDD2AQ9UIY3 292 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 NLRC5Q86WI3 1866 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 COL4A4P53420 1690 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 TMEM265A0A087WTH1 108 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 SH3PXD2BA1X283 911 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 BET1O15155 118 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 TM9SF1O15321 606 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 F10P00742 488 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 APOC1P02654 83 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 FTH1P02794 183 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 CD1AP06126 327 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 LYL1P12980 280 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 CBR1P16152 277 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 EPCAMP16422 314 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 IL7RP16871 459 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 CASP14P31944 242 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 VHLP40337 213 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 EIF2S3P41091 472 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 BCL6P41182 706 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 NSFP46459 744 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 EIF2B2P49770 351 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 KPNA2P52292 529 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 HYAL1Q12794 435 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 CDH17Q12864 832 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ITGADQ13349 1161 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 SELPLGQ14242 412 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 RAB39AQ14964 217 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 TESK1Q15569 626 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNHIT3Q15649 155 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 PSMD5Q16401 504 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 EXOC3L4Q17RC7 722 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNF699Q32M78 642 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 MTX3Q5HYI7 312 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms