RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 BBS4Q96RK4 519 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 SMC6Q96SB8 1091 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 DMRTA2Q96SC8 542 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 ZNF703Q9H7S9 590 aaPredicted RBP12.2□□□□□ -0.46
RNF4-215ENST00000511843 MYNNQ9NPC7 610 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 PNPLA3Q9NST1 481 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 SIRT5Q9NXA8 310 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 CNIH4Q9P003 139 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 BOKQ9UMX3 212 aaPredicted RBP12.2□□□□□ -0.46
RNF4-215ENST00000511843 DNAJC15Q9Y5T4 150 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 CENPEQ02224 2701 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 PCNX3Q9H6A9 2034 aa12.2□□□□□ -0.46
RNF4-215ENST00000511843 MED12Q93074 2177 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 MAST4O15021 2626 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 H3BQF6 201 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 TYROBPO43914 113 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 ABCB1P08183 1280 aaPredicted RBP12.19□□□□□ -0.46
RNF4-215ENST00000511843 ENDOUP21128 410 aaKnown RBP12.19□□□□□ -0.46
RNF4-215ENST00000511843 CORO7P57737 925 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 PLCXD2Q0VAA5 305 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 KIAA0040Q15053 153 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 GALNTL6Q49A17 601 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 CES4AQ5XG92 561 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 MTFR2Q6P444 385 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 RPTNQ6XPR3 784 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 RGS9BPQ6ZS82 235 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 Q6ZSR9 355 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 TRILQ7L0X0 811 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 DDIASQ8IXT1 998 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 DND1Q8IYX4 353 aaKnown RBP12.19□□□□□ -0.46
RNF4-215ENST00000511843 FAM9CQ8IZT9 166 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 ZNF808Q8N4W9 903 aaPredicted RBP12.19□□□□□ -0.46
RNF4-215ENST00000511843 ZNF675Q8TD23 568 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 LCORQ96JN0 433 aaPredicted RBP12.19□□□□□ -0.46
RNF4-215ENST00000511843 PKNOX2Q96KN3 472 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 RILPQ96NA2 401 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 TMEM109Q9BVC6 243 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 SLC6A15Q9H2J7 730 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 LDAHQ9H6V9 325 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 EXO5Q9H790 373 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 LRTM1Q9HBL6 345 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 ZFP64Q9NPA5 681 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 MIEF1Q9NQG6 463 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 GIMAP4Q9NUV9 329 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 C1orf109Q9NX04 203 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 SPRR3Q9UBC9 169 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 RAB21Q9UL25 225 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 UNC79Q9P2D8 2635 aa12.19□□□□□ -0.46
RNF4-215ENST00000511843 WDR91A4D1P6 747 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 MYO1GB0I1T2 1018 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 E9PLN8 166 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 SLC28A1O00337 649 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 TP53I11O14683 189 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 PIP5K1BO14986 540 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 RGS14O43566 566 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 AKAP10O43572 662 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 NPHS1O60500 1241 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 UGT2B11O75310 529 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 TRIM3O75382 744 aaPredicted RBP12.18□□□□□ -0.46
RNF4-215ENST00000511843 PPM1BO75688 479 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 IGHG3P01860 377 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 SNRPB2P08579 225 aaKnown RBP12.18□□□□□ -0.46
RNF4-215ENST00000511843 GDF1P27539 372 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 HTR1EP28566 365 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 MC3RP41968 323 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 MAN2A2P49641 1150 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 TMED10P49755 219 aaKnown RBP12.18□□□□□ -0.46
RNF4-215ENST00000511843 NCBP2P52298 156 aaKnown RBP eCLIP12.18□□□□□ -0.465e-11■■■□□ 14.7
RNF4-215ENST00000511843 RPL38P63173 70 aaKnown RBP12.18□□□□□ -0.46
RNF4-215ENST00000511843 SLC10A1Q14973 349 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 CEBPEQ15744 281 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 HYAL4Q2M3T9 481 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 UGT3A2Q3SY77 523 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 GXYLT1Q4G148 440 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 RFTN2Q52LD8 501 aaPredicted RBP12.18□□□□□ -0.46
RNF4-215ENST00000511843 SH2D4BQ5SQS7 431 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 FNDC7Q5VTL7 733 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 SP5Q6BEB4 398 aaPredicted RBP12.18□□□□□ -0.46
RNF4-215ENST00000511843 PAOXQ6QHF9 649 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 TMEM107Q6UX40 140 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 NPSR1Q6W5P4 371 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 WDR53Q7Z5U6 358 aaPredicted RBP12.18□□□□□ -0.46
RNF4-215ENST00000511843 C17orf47Q8NEP4 570 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 TWIST2Q8WVJ9 160 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 HGDQ93099 445 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 TMBIM1Q969X1 311 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 ZNF597Q96LX8 424 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 TSSK3Q96PN8 268 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 NODALQ96S42 347 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 VKORC1Q9BQB6 163 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 TRMOQ9BU70 441 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 CENPHQ9H3R5 247 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 GLIPR2Q9H4G4 154 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 FOLH1BQ9HBA9 442 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 GALNT9Q9HCQ5 603 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 SENP1Q9P0U3 644 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 BAIAP2L1Q9UHR4 511 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 TRAF6Q9Y4K3 522 aa12.18□□□□□ -0.46
RNF4-215ENST00000511843 NUP214P35658 2090 aaPredicted RBP12.17□□□□□ -0.46
RNF4-215ENST00000511843 TRGV5A0A0B4J1U4 118 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms