RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 RAB1AP62820 205 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 BTN3A2P78410 334 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 CCZ1BP86790 482 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 CCZ1P86791 482 aaPredicted RBP6.12□□□□□ -1.43
COPS4-209ENST00000511653 PLGLB1Q02325 96 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 FOXO1Q12778 655 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 FOXD4Q12950 439 aaPredicted RBP6.12□□□□□ -1.43
COPS4-209ENST00000511653 RBBP5Q15291 538 aaKnown RBP6.12□□□□□ -1.43
COPS4-209ENST00000511653 ZNF750Q32MQ0 723 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 HECTD2Q5U5R9 776 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 CES4AQ5XG92 561 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 NIPAL1Q6NVV3 410 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 ZNF585AQ6P3V2 769 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 B3GNT6Q6ZMB0 384 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 TRILQ7L0X0 811 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 THOC6Q86W42 341 aaKnown RBP6.12□□□□□ -1.43
COPS4-209ENST00000511653 CNTN4Q8IWV2 1026 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 GPATCH11Q8N954 259 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 MS4A14Q96JA4 679 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 FOXC2Q99958 501 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 GPATCH1Q9BRR8 931 aaKnown RBP6.12□□□□□ -1.43
COPS4-209ENST00000511653 WDR83Q9BRX9 315 aaKnown RBP6.12□□□□□ -1.43
COPS4-209ENST00000511653 CNPPD1Q9BV87 410 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 ZMAT3Q9HA38 289 aaKnown RBP6.12□□□□□ -1.43
COPS4-209ENST00000511653 PELI2Q9HAT8 420 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 ADAP2Q9NPF8 381 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 SEMA4BQ9NPR2 832 aaPredicted RBP6.12□□□□□ -1.43
COPS4-209ENST00000511653 PRTFDC1Q9NRG1 225 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 HPF1Q9NWY4 346 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 SLC22A14Q9Y267 594 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 PLEKHA6Q9Y2H5 1048 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 YARS2Q9Y2Z4 477 aaKnown RBP6.12□□□□□ -1.43
COPS4-209ENST00000511653 HEATR5AQ86XA9 2040 aa6.12□□□□□ -1.43
COPS4-209ENST00000511653 NPEPPSL1A6NEC2 478 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 KDM4EB2RXH2 506 aaPredicted RBP6.11□□□□□ -1.43
COPS4-209ENST00000511653 CDC7O00311 574 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 ERI3O43414 337 aaKnown RBP6.11□□□□□ -1.43
COPS4-209ENST00000511653 ZFAND5O76080 213 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 CCL3P10147 92 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 DDCP20711 480 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 MALP21145 153 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 GDF5P43026 501 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 ZFP36L2P47974 494 aaKnown RBP6.11□□□□□ -1.43
COPS4-209ENST00000511653 RAB38P57729 211 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 FOLH1Q04609 750 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 DUSP2Q05923 314 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 SLC13A2Q13183 592 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 NFYCQ13952 458 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 RNASEH2BQ5TBB1 312 aaKnown RBP6.11□□□□□ -1.43
COPS4-209ENST00000511653 CCDC137Q6PK04 289 aaKnown RBP6.11□□□□□ -1.43
COPS4-209ENST00000511653 SLC22A16Q86VW1 577 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 CLYBLQ8N0X4 340 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 FAM109AQ8N4B1 249 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 TBC1D19Q8N5T2 526 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 TRPV3Q8NET8 790 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 OR10Q1Q8NGQ4 319 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 PTPMT1Q8WUK0 201 aaPredicted RBP6.11□□□□□ -1.43
COPS4-209ENST00000511653 ATL1Q8WXF7 558 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 MAGOHBQ96A72 148 aaKnown RBP6.11□□□□□ -1.43
COPS4-209ENST00000511653 MS4A6EQ96DS6 147 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 CERS2Q96G23 380 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 QRFPRQ96P65 431 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 AIF1LQ9BQI0 150 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 CCDC77Q9BR77 488 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 CLK4Q9HAZ1 481 aaKnown RBP6.11□□□□□ -1.43
COPS4-209ENST00000511653 HOMER3Q9NSC5 361 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 TUBA8Q9NY65 449 aaPredicted RBP6.11□□□□□ -1.43
COPS4-209ENST00000511653 SPRR3Q9UBC9 169 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 SLC23A1Q9UHI7 598 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 ST6GALNAC2Q9UJ37 374 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 USF3Q68DE3 2245 aa6.11□□□□□ -1.43
COPS4-209ENST00000511653 A0A088AWK7 358 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 A0A1B0GVC2 190 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ATP6AP2A0A1C7CYW4 349 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 LRIT2A6NDA9 550 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 PABPN1LA6NDY0 278 aaKnown RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 URADA6NGE7 173 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 CYR61O00622 381 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 BCKDKO14874 412 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 PROM1O43490 865 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ATP6AP2O75787 350 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 HRGP04196 525 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ALOX15P16050 662 aaPredicted RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 ZNF37AP17032 561 aaPredicted RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 CRHR1P34998 444 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 SLC6A12P48065 614 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 PLA2G16P53816 162 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 WNT3P56703 355 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 HSD17B7P56937 341 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ID2Q02363 134 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ELAVL1Q15717 326 aaKnown RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 CYP1B1Q16678 543 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 FBXO48Q5FWF7 155 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ZMAT1Q5H9K5 638 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 C1orf185Q5T7R7 199 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 TEDDM1Q5T9Z0 273 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ARSKQ6UWY0 536 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 HSDL2Q6YN16 418 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 SEM1Q6ZVN7 128 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 WDR53Q7Z5U6 358 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms