RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SPINT2O43291 252 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 KLHL41O60662 606 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 KLF7O75840 302 aaPredicted RBP5.65□□□□□ -1.5
USP53-206ENST00000510737 PAEPP09466 180 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 AZU1P20160 251 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 OTX2P32243 289 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 CDK3Q00526 305 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 STK4Q13043 487 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 C3AR1Q16581 482 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 DECR1Q16698 335 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 FAM92BQ6ZTR7 304 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 PRSS42Q7Z5A4 293 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 SPAG16Q8N0X2 631 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 CLEC1AQ8NC01 280 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 FBXL13Q8NEE6 735 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 FER1L6-AS2Q96M78 137 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 TRIM62Q9BVG3 475 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 BLZF1Q9H2G9 400 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 PHPT1Q9NRX4 125 aaPredicted RBP5.65□□□□□ -1.5
USP53-206ENST00000510737 ACSS1Q9NUB1 689 aaPredicted RBP5.65□□□□□ -1.5
USP53-206ENST00000510737 PIGVQ9NUD9 493 aa5.65□□□□□ -1.5
USP53-206ENST00000510737 TLCD2A6NGC4 264 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 PDXKO00764 312 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 MAPK13O15264 365 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 KDELR3O43731 214 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 SCRG1O75711 98 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 GRAP2O75791 330 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 TSHBP01222 138 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 KLK3P07288 261 aaPredicted RBP5.64□□□□□ -1.51
USP53-206ENST00000510737 GTF2H1P32780 548 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 RORAP35398 523 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 ACADSBP45954 432 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 UFM1P61960 85 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 PPP1CAP62136 330 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 UBE2IP63279 158 aaKnown RBP5.64□□□□□ -1.51
USP53-206ENST00000510737 RAD51Q06609 339 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 CYTH1Q15438 398 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 C18orf63Q68DL7 685 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 DOK6Q6PKX4 331 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 TMEM270Q6UE05 265 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 LRRC31Q6UY01 552 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 INTS8Q75QN2 995 aaKnown RBP5.64□□□□□ -1.51
USP53-206ENST00000510737 PIWIL4Q7Z3Z4 852 aaKnown RBP5.64□□□□□ -1.51
USP53-206ENST00000510737 DNAAF3Q8N9W5 541 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 SIDT2Q8NBJ9 832 aaKnown RBP5.64□□□□□ -1.51
USP53-206ENST00000510737 TAAR8Q969N4 342 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 ZNF514Q96K75 400 aaPredicted RBP5.64□□□□□ -1.51
USP53-206ENST00000510737 CNDP1Q96KN2 507 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 KLHL15Q96M94 604 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 GDAP1L1Q96MZ0 367 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 GBP5Q96PP8 586 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 OR2M4Q96R27 311 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 ZNF559Q9BR84 538 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 MARCH4Q9P2E8 410 aaPredicted RBP5.64□□□□□ -1.51
USP53-206ENST00000510737 SEC14L3Q9UDX4 400 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 CNOT8Q9UFF9 292 aaKnown RBP5.64□□□□□ -1.51
USP53-206ENST00000510737 PLEKHA6Q9Y2H5 1048 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 ABCA4P78363 2273 aa5.64□□□□□ -1.51
USP53-206ENST00000510737 TEX13CA0A0J9YWL9 993 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 GAGE10A6NGK3 116 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 H3BQV1 296 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 BUB1O43683 1085 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 SLC19A2O60779 497 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 SLCO2B1O94956 709 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 IGSF6O95976 241 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 JCHAINP01591 159 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 F3P13726 295 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 AHRP35869 848 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 PGM1P36871 562 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 APOBEC1P41238 236 aaKnown RBP5.63□□□□□ -1.51
USP53-206ENST00000510737 GEMIN4P57678 1058 aaKnown RBP5.63□□□□□ -1.51
USP53-206ENST00000510737 GSDMDP57764 484 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 ACY1Q03154 408 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 ENPEPQ07075 957 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 LRMPQ12912 555 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 CBWD6Q4V339 395 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 CBWD3Q5JTY5 395 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 CES4AQ5XG92 561 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 FAM198BQ6UWH4 519 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 ZNF704Q6ZNC4 412 aaPredicted RBP5.63□□□□□ -1.51
USP53-206ENST00000510737 TMEM26Q6ZUK4 368 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 DPPA4Q7L190 304 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 PHLDB2Q86SQ0 1253 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 RAB43Q86YS6 212 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 MAP7D3Q8IWC1 876 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 LYG1Q8N1E2 194 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 WDTC1Q8N5D0 677 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 KIAA0895Q8NCT3 520 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 ZSCAN31Q96LW9 406 aaPredicted RBP5.63□□□□□ -1.51
USP53-206ENST00000510737 NSMCE3Q96MG7 304 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 ZNF641Q96N77 438 aaPredicted RBP5.63□□□□□ -1.51
USP53-206ENST00000510737 H2AFJQ9BTM1 129 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 KRTAP4-3Q9BYR4 195 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 ZYG11BQ9C0D3 744 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 UCK1Q9HA47 277 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 P4HTMQ9NXG6 502 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 LHX3Q9UBR4 397 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 CACNG5Q9UF02 275 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 EPHA6Q9UF33 1036 aa5.63□□□□□ -1.51
USP53-206ENST00000510737 ACAD8Q9UKU7 415 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms