RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 OR8K5Q8NH50 307 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 BCL7CQ8WUZ0 217 aaPredicted RBP14.09□□□□□ -0.15
USP38-202ENST00000510377 CLIP3Q96DZ5 547 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 CCDC120Q96HB5 630 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 TREX2Q9BQ50 279 aaPredicted RBP14.09□□□□□ -0.15
USP38-202ENST00000510377 SAP130Q9H0E3 1048 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 RDH8Q9NYR8 311 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 AKR7A2O43488 359 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 CD160O95971 181 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 SSTR2P30874 369 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 MAT2AP31153 395 aaKnown RBP14.09□□□□□ -0.15
USP38-202ENST00000510377 FLYWCH1Q4VC44 716 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 RASSF6Q6ZTQ3 369 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 CEACAM19Q7Z692 300 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 NLGN4YQ8NFZ3 816 aaPredicted RBP14.09□□□□□ -0.15
USP38-202ENST00000510377 SLC7A13Q8TCU3 470 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 IRF7Q92985 503 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 DPP7Q9UHL4 492 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 NDRG2Q9UN36 371 aaKnown RBP14.09□□□□□ -0.15
USP38-202ENST00000510377 MGAMO43451 1857 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 XCR1P46094 333 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 HDDC2Q7Z4H3 204 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 CPOQ8IVL8 374 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 NRMQ8IXM6 262 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 OR6F1Q8NGZ6 308 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 OR2A14Q96R47 310 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 ABCG4Q9H172 646 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 NAALAD2Q9Y3Q0 740 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 PRAMEF4O60810 478 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 PRKRAO75569 313 aaKnown RBP14.09□□□□□ -0.15
USP38-202ENST00000510377 NT5EP21589 574 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 ELAVL4P26378 380 aaKnown RBP14.09□□□□□ -0.15
USP38-202ENST00000510377 PYCR1P32322 319 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 PTGS2P35354 604 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 AP2S1P53680 142 aaPredicted RBP14.09□□□□□ -0.15
USP38-202ENST00000510377 ZNF805Q5CZA5 627 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 PRAMEF9Q5VWM5 478 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 OR6K6Q8NGW6 343 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 OR4C6Q8NH72 309 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 CHTF18Q8WVB6 975 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 SPRYD4Q8WW59 207 aaPredicted RBP14.09□□□□□ -0.15
USP38-202ENST00000510377 CXorf40BQ96DE9 158 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 CAMK1GQ96NX5 476 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 HHATLQ9HCP6 504 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 TDP1Q9NUW8 608 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 HCFC1R1Q9NWW0 138 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 SPACA6W5XKT8 324 aa14.09□□□□□ -0.15
USP38-202ENST00000510377 LRRC72A6NJI9 287 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 PROM1O43490 865 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 HCN1O60741 890 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 ETV5P41161 510 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 ETV1P50549 477 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 CAMK1Q14012 370 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 FXNQ16595 210 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 CCDC190Q86UF4 302 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 ZNF689Q96CS4 500 aaPredicted RBP14.08□□□□□ -0.16
USP38-202ENST00000510377 RC3H2Q9HBD1 1191 aaKnown RBP14.08□□□□□ -0.16
USP38-202ENST00000510377 CUEDC1Q9NWM3 386 aaPredicted RBP14.08□□□□□ -0.16
USP38-202ENST00000510377 FBXL12Q9NXK8 326 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 DEC1Q9P2X7 70 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 A0A075B6Q4 140 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 SMAD9O15198 467 aaKnown RBP14.08□□□□□ -0.16
USP38-202ENST00000510377 IL1AP01583 271 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 HMGN1P05114 100 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 POU4F3Q15319 338 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 SSX1Q16384 188 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 KHDRBS2Q5VWX1 349 aaKnown RBP14.08□□□□□ -0.16
USP38-202ENST00000510377 OR52I1Q8NGK6 324 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 FUZQ9BT04 418 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 RGPD3A6NKT7 1758 aaPredicted RBP14.08□□□□□ -0.16
USP38-202ENST00000510377 RGPD4Q7Z3J3 1758 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 HYKKA2RU49 373 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 CD3GP09693 182 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 SDHBP21912 280 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 SFRP4Q6FHJ7 346 aaPredicted RBP14.08□□□□□ -0.16
USP38-202ENST00000510377 CYB561A3Q8NBI2 242 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 ZNF354BQ96LW1 612 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 OR4K3Q96R72 315 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 GINS4Q9BRT9 223 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 DPH7Q9BTV6 452 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 TTYH1Q9H313 450 aaPredicted RBP14.08□□□□□ -0.16
USP38-202ENST00000510377 TRIM36Q9NQ86 728 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 THSD1Q9NS62 852 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 SPATA6Q9NWH7 488 aaPredicted RBP14.08□□□□□ -0.16
USP38-202ENST00000510377 BACE2Q9Y5Z0 518 aa14.08□□□□□ -0.16
USP38-202ENST00000510377 POLR1CO15160 346 aaPredicted RBP14.07□□□□□ -0.16
USP38-202ENST00000510377 GMFGO60234 142 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 C1orf105O95561 183 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 TLX1P31314 330 aaPredicted RBP14.07□□□□□ -0.16
USP38-202ENST00000510377 MPIP34949 423 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 NDUFAF5Q5TEU4 345 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 ZNF613Q6PF04 617 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 DCUN1D3Q8IWE4 304 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 OR4N5Q8IXE1 308 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 OR51L1Q8NGJ5 315 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 GNPDA2Q8TDQ7 276 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 CACNG6Q9BXT2 260 aa14.07□□□□□ -0.16
USP38-202ENST00000510377 DDX31Q9H8H2 851 aaKnown RBP14.07□□□□□ -0.16
USP38-202ENST00000510377 MRPS30Q9NP92 439 aaKnown RBP14.07□□□□□ -0.16
USP38-202ENST00000510377 TRIOBPQ9H2D6 2365 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms