RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 MTMR11A4FU01 709 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 WRBO00258 174 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 RNF113AO15541 343 aaKnown RBP3.32□□□□□ -1.88
CAST-229ENST00000510098 ARHGEF9O43307 516 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 ECE2O60344 883 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 ACSL4O60488 711 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 CPNE6O95741 557 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 MT-ND1P03886 318 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 APRTP07741 180 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 ZCCHC18P0CG32 403 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 SLC2A3P11169 496 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 GOT1P17174 413 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 FCARP24071 287 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 OR1D2P34982 312 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 CA8P35219 290 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 DLSTP36957 453 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 OR3A3P47888 321 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 OR1G1P47890 313 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 ACADVLP49748 655 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 CARD18P57730 90 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 RPP38P78345 283 aaKnown RBP3.32□□□□□ -1.88
CAST-229ENST00000510098 CSTF1Q05048 431 aaKnown RBP3.32□□□□□ -1.88
CAST-229ENST00000510098 NCBP1Q09161 790 aaKnown RBP3.32□□□□□ -1.88
CAST-229ENST00000510098 HSPA14Q0VDF9 509 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 MSLNQ13421 630 aaPredicted RBP3.32□□□□□ -1.88
CAST-229ENST00000510098 DRP2Q13474 957 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 SYCP1Q15431 976 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 FCN2Q15485 313 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 TAB1Q15750 504 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 EXOC3L2Q2M3D2 409 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 BCL7AQ4VC05 210 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 AGKQ53H12 422 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 ARMCX4Q5H9R4 360 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 ZNF311Q5JNZ3 666 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 ATP1A1-AS1Q5TC04 95 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 TTC23Q5W5X9 447 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 HIST2H2AA3Q6FI13 130 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 NIPAL3Q6P499 406 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 BLOC1S2Q6QNY1 142 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 CBLN3Q6UW01 205 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 YRDCQ86U90 279 aaKnown RBP3.32□□□□□ -1.88
CAST-229ENST00000510098 ZNF614Q8N883 585 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 OR4D10Q8NGI6 311 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 ZNF519Q8TB69 540 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 RAB3IL1Q8TBN0 382 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 PNPT1Q8TCS8 783 aaKnown RBP3.32□□□□□ -1.88
CAST-229ENST00000510098 SLC2A14Q8TDB8 520 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 UBTD2Q8WUN7 234 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 DNAJA4Q8WW22 397 aaPredicted RBP3.32□□□□□ -1.88
CAST-229ENST00000510098 STARD8Q92502 1023 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 PHYHIPQ92561 330 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 GLYATL1Q969I3 302 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 NXPE2Q96DL1 559 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 VPS35Q96QK1 796 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 KRT12Q99456 494 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 IL12RB2Q99665 862 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 SLC39A3Q9BRY0 314 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 GANQ9H2C0 597 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 TMEM181Q9P2C4 612 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 SUN2Q9UH99 717 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 FBXL4Q9UKA2 621 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 POMT2Q9UKY4 750 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 ZNF490Q9ULM2 529 aaPredicted RBP3.32□□□□□ -1.88
CAST-229ENST00000510098 TMED7Q9Y3B3 224 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 OR10H1Q9Y4A9 318 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 SLCO1B1Q9Y6L6 691 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 CSNK1G3Q9Y6M4 447 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 TNIKQ9UKE5 1360 aa3.32□□□□□ -1.88
CAST-229ENST00000510098 SNED1Q8TER0 1413 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 IGLV7-46A0A075B6I9 117 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 A0A087WZ39 114 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 SPECC1L-ADORA2AF8WAN1 911 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 NDUFS8O00217 210 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 SURF4O15260 269 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 SAP30O75446 220 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 CLN5O75503 358 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 FLOT1O75955 427 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 UFL1O94874 794 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 DUS4LO95620 317 aaKnown RBP3.31□□□□□ -1.88
CAST-229ENST00000510098 GSTA2P09210 222 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 UBTFL6P0CB48 400 aaPredicted RBP3.31□□□□□ -1.88
CAST-229ENST00000510098 ZNF883P0CG24 379 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 B4GALT1P15291 398 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 FOSL2P15408 326 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 ZNF44P15621 663 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 PRKACGP22612 351 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 PTBP1P26599 531 aaKnown RBP eCLIP3.31□□□□□ -1.88
CAST-229ENST00000510098 RDXP35241 583 aaKnown RBP3.31□□□□□ -1.88
CAST-229ENST00000510098 PTGFRP43088 359 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 MAGEA1P43355 309 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 PPT1P50897 306 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 GEMP55040 296 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 OR1D5P58170 312 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 NLRP11P59045 1033 aaKnown RBP3.31□□□□□ -1.88
CAST-229ENST00000510098 HERV-K104P63124 156 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 CYCSP99999 105 aaKnown RBP3.31□□□□□ -1.88
CAST-229ENST00000510098 CNTN2Q02246 1040 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 ACY1Q03154 408 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 SRSF9Q13242 221 aaKnown RBP eCLIP3.31□□□□□ -1.88
CAST-229ENST00000510098 IL18Q14116 193 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms