RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 PCSK2P16519 638 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 DDCP20711 480 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 GDF1P27539 372 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 NTSP30990 170 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 KRT20P35900 424 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 PPICP45877 212 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 MRPS35P82673 323 aaKnown RBP17.13■□□□□ 0.33
UBE3D-207ENST00000509102 MGAT2Q10469 447 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 LTB4RQ15722 352 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 NNATQ16517 81 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 TRMT12Q53H54 448 aaKnown RBP17.13■□□□□ 0.33
UBE3D-207ENST00000509102 ZNF585AQ6P3V2 769 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 IKBIPQ70UQ0 350 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 NUP54Q7Z3B4 507 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 TRABD2AQ86V40 505 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 PRR22Q8IZ63 422 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 C11orf24Q96F05 449 aaPredicted RBP17.13■□□□□ 0.33
UBE3D-207ENST00000509102 RILPQ96NA2 401 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 STMN4Q9H169 189 aaPredicted RBP17.13■□□□□ 0.33
UBE3D-207ENST00000509102 C12orf65Q9H3J6 166 aaKnown RBP17.13■□□□□ 0.33
UBE3D-207ENST00000509102 METTL7AQ9H8H3 244 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 EML4Q9HC35 981 aaKnown RBP17.13■□□□□ 0.33
UBE3D-207ENST00000509102 LGALS13Q9UHV8 139 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 CELSR2Q9HCU4 2923 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 FRG2CA6NGY1 282 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 ADAM10O14672 748 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 AZIN1O14977 448 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 SEC22BO75396 215 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 SLITRK5O94991 958 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 LRATO95237 230 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 CBX7O95931 251 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 DRD5P21918 477 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 ACVR2AP27037 513 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 PCLAFQ15004 111 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 ZNF628Q5EBL2 1059 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 BANPQ8N9N5 519 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 OR5M9Q8NGP3 310 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 OR9A2Q8NGT5 310 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 AENQ8WTP8 325 aaKnown RBP17.12■□□□□ 0.33
UBE3D-207ENST00000509102 CAVIN3Q969G5 261 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 DTNBP1Q96EV8 351 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 ANGPTL4Q9BY76 406 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 ACKR4Q9NPB9 350 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 MYNNQ9NPC7 610 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 PNPLA3Q9NST1 481 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 TAS2R9Q9NYW1 312 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 DTX4Q9Y2E6 619 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 POLR3HQ9Y535 204 aaPredicted RBP17.12■□□□□ 0.33
UBE3D-207ENST00000509102 LIPGQ9Y5X9 500 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 PCNX1Q96RV3 2341 aa17.12■□□□□ 0.33
UBE3D-207ENST00000509102 LRRC3CA6NJW4 275 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 FAM47E-STBD1D6RA91 191 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 ZNF500O60304 480 aaPredicted RBP17.11■□□□□ 0.33
UBE3D-207ENST00000509102 WDR1O75083 606 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 COQ9O75208 318 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 TRIM3O75382 744 aaPredicted RBP17.11■□□□□ 0.33
UBE3D-207ENST00000509102 TRAPPC6AO75865 159 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 ABCB1P08183 1280 aaPredicted RBP17.11■□□□□ 0.33
UBE3D-207ENST00000509102 HOXD4P09016 255 aaPredicted RBP17.11■□□□□ 0.33
UBE3D-207ENST00000509102 CELA3AP09093 270 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 GABRA1P14867 456 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 ELAVL4P26378 380 aaKnown RBP17.11■□□□□ 0.33
UBE3D-207ENST00000509102 CHRNB4P30926 498 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 PTGER4P35408 488 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 GCKP35557 465 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 DUSP2Q05923 314 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 TOMM20Q15388 145 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 CLEC6AQ6EIG7 209 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 NOXRED1Q6NXP6 359 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 B3GNT6Q6ZMB0 384 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 NCCRP1Q6ZVX7 275 aaPredicted RBP17.11■□□□□ 0.33
UBE3D-207ENST00000509102 TICAM1Q8IUC6 712 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 KAT2AQ92830 837 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 TMCO6Q96DC7 493 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 OMA1Q96E52 524 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 FAM111AQ96PZ2 611 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 GATA5Q9BWX5 397 aaPredicted RBP17.11■□□□□ 0.33
UBE3D-207ENST00000509102 PROK2Q9HC23 129 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 C1orf109Q9NX04 203 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 KLRF1Q9NZS2 232 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 FIS1Q9Y3D6 152 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 TEX15Q9BXT5 2789 aa17.11■□□□□ 0.33
UBE3D-207ENST00000509102 EML6Q6ZMW3 1958 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 NCOA6Q14686 2063 aaPredicted RBP17.1■□□□□ 0.33
UBE3D-207ENST00000509102 NPHS1O60500 1241 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 PLOD3O60568 738 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 RFPL3SP0C7P2 107 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 GRNP28799 593 aaKnown RBP17.1■□□□□ 0.33
UBE3D-207ENST00000509102 CASP3P42574 277 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 EMDP50402 254 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 NCBP2P52298 156 aaKnown RBP eCLIP17.1■□□□□ 0.33
UBE3D-207ENST00000509102 SNTA1Q13424 505 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 CEBPEQ15744 281 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 SLC30A6Q6NXT4 461 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 NEIL3Q8TAT5 605 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 TMEM41AQ96HV5 264 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 LRTM1Q9HBL6 345 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 ALKBH4Q9NXW9 302 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 ZNF407Q9C0G0 2248 aa17.1■□□□□ 0.33
UBE3D-207ENST00000509102 C15orf38-AP3S2A0A0A6YYH1 394 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms