RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 DYNC2LI1Q8TCX1 351 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 RNF183Q96D59 192 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 TRMT61AQ96FX7 289 aaKnown RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 MTERF1Q99551 399 aaKnown RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PAAF1Q9BRP4 392 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PINK1Q9BXM7 581 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ULBP3Q9BZM4 244 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SLC6A17Q9H1V8 727 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 FN3KRPQ9HA64 309 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ASAH2Q9NR71 780 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PLAGL2Q9UPG8 496 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 GRID2IPA4D2P6 1211 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 MANSC4A6NHS7 340 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 FAM74A7A6NL05 159 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ADM5C9JUS6 153 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 LRRN3E7EW58 273 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 DSCR3O14972 297 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 CLOCKO15516 846 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 TNFSF14O43557 240 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 NDUFA10O95299 355 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SCG5P05408 212 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 NT5EP21589 574 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 DRD5P21918 477 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 CASP1P29466 404 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 AXLP30530 894 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ACTR1BP42025 376 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ARL6IP1Q15041 203 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 CTF1Q16619 201 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 TRIM16LQ309B1 348 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 FAM74A3Q4VXF1 159 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SLC8B1Q6J4K2 584 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SSX7Q7RTT5 188 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PDZD3Q86UT5 571 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF677Q86XU0 584 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 CCDC60Q8IWA6 550 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 IZUMO1Q8IYV9 350 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PARP16Q8N5Y8 322 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 EID2Q8N6I1 236 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 CMASQ8NFW8 434 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 GPX8Q8TED1 209 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 MRPS31Q92665 395 aaKnown RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 GGHQ92820 318 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 CASD1Q96PB1 797 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 VCXQ9H320 206 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 MTHFD2LQ9H903 347 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 NHEJ1Q9H9Q4 299 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ENY2Q9NPA8 101 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SIRT7Q9NRC8 400 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 CLEC5AQ9NY25 188 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ING4Q9UNL4 249 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PATJQ8NI35 1801 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ENTPD6O75354 484 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 JRKO75564 520 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 KDM4BO94953 1096 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SOX30O94993 753 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SERPINA1P01009 418 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 HSD17B1P14061 328 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 EDN2P20800 178 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ATP6V1B2P21281 511 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ACVR1BP36896 505 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ERVK-25P63136 954 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 NTHL1P78549 312 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 RPL19P84098 196 aaKnown RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 MYL7Q01449 175 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PHKG1Q16816 387 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 CTU2Q2VPK5 515 aaKnown RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 NKAPLQ5M9Q1 402 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 VSTM1Q6UX27 236 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ZBTB2Q8N680 514 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 EMC1Q8N766 993 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 FADS6Q8N9I5 356 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ACBD4Q8NC06 268 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 AGBL5Q8NDL9 886 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 OR52B4Q8NGK2 314 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 C3orf30Q96M34 536 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF578Q96N58 590 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SERPINI1Q99574 410 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PTDSS2Q9BVG9 487 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 FRMD8Q9BZ67 464 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PORCNQ9H237 461 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SLC6A15Q9H2J7 730 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SMOC2Q9H3U7 446 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SEMA4BQ9NPR2 832 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 CRIM1Q9NZV1 1036 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ZNHIT2Q9UHR6 403 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF223Q9UK11 482 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SAMD4AQ9UPU9 718 aaKnown RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 RBMX2Q9Y388 322 aaKnown RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ATG4BQ9Y4P1 393 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PASKQ96RG2 1323 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 UQCRHLA0A096LP55 91 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 A0A0G2JNJ9 132 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 MBD3L5A6NJ08 208 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-209ENST00000508871 DVL2O14641 736 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 IL6P05231 212 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 UQCRHP07919 91 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 FCGR2AP12318 317 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 BMP7P18075 431 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 TACR2P21452 398 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 TGM1P22735 817 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms