RNA–Protein interactions for RNA: ENST00000508735.5

SNHG4-206, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 310 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-206ENST00000508735 GALNT9Q9HCQ5 603 aa11.14□□□□□ -0.63
SNHG4-206ENST00000508735 EHD3Q9NZN3 535 aa11.14□□□□□ -0.63
SNHG4-206ENST00000508735 BCAP29Q9UHQ4 241 aa11.14□□□□□ -0.63
SNHG4-206ENST00000508735 DMGDHQ9UI17 866 aaKnown RBP11.14□□□□□ -0.63
SNHG4-206ENST00000508735 ZNF225Q9UK10 706 aa11.14□□□□□ -0.63
SNHG4-206ENST00000508735 CBLCQ9ULV8 474 aa11.14□□□□□ -0.63
SNHG4-206ENST00000508735 ZNF469Q96JG9 3925 aaPredicted RBP11.14□□□□□ -0.63
SNHG4-206ENST00000508735 MBD3L4A6NDZ8 208 aaPredicted RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 MBD3L3A6NE82 208 aaPredicted RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 GOLGA6L10A6NI86 522 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 MBD3L5A6NJ08 208 aaPredicted RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 A8MT66 165 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 TRIM49D1C9J1S8 452 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 POC1B-GALNT4F8VUJ3 575 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 ICOSLGO75144 302 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 GUCY1B2O75343 617 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 OR4F21O95013 312 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 OTCP00480 354 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 COL6A2P12110 1019 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 CD99P14209 185 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 NAGAP17050 411 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 CSNK2A2P19784 350 aaPredicted RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 TACR1P25103 407 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 CNTFP26441 200 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 DEKP35659 375 aaKnown RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 PEX19P40855 299 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 SLCO1A2P46721 670 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 SERPINB9P50453 376 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 CKAP4Q07065 602 aaKnown RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 PLCXD2Q0VAA5 305 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 LTB4RQ15722 352 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 CEBPEQ15744 281 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 TCHHL1Q5QJ38 904 aaPredicted RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 SLC30A6Q6NXT4 461 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 TMEM81Q6P7N7 255 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 NUP54Q7Z3B4 507 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 C1orf52Q8N6N3 182 aaKnown RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 OR52R1Q8NGF1 315 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 MBD3L2Q8NHZ7 208 aaPredicted RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 FAM222BQ8WU58 562 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 DCAKDQ8WVC6 231 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 CTHRC1Q96CG8 243 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 KLHL29Q96CT2 875 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 HSPBAP1Q96EW2 488 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 CNRIP1Q96F85 164 aaPredicted RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 LRRC46Q96FV0 321 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 RMND5BQ96G75 393 aaPredicted RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 LCORQ96JN0 433 aaPredicted RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 ZNF681Q96N22 645 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 MRPL57Q9BQC6 102 aaKnown RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 OSBPL11Q9BXB4 747 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 C1QTNF3Q9BXJ4 246 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 MRPL46Q9H2W6 279 aaKnown RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 ANKRA2Q9H9E1 313 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 BRF2Q9HAW0 419 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 SERHLQ9NQF3 203 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 HEY2Q9UBP5 337 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 MTRF1LQ9UGC7 380 aaKnown RBP11.13□□□□□ -0.63
SNHG4-206ENST00000508735 MAPRE3Q9UPY8 281 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 CFL2Q9Y281 166 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 PLEKHA6Q9Y2H5 1048 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 PLLPQ9Y342 182 aa11.13□□□□□ -0.63
SNHG4-206ENST00000508735 PRRC2AP48634 2157 aaKnown RBP11.12□□□□□ -0.63
SNHG4-206ENST00000508735 SNPHO15079 494 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 CDH16O75309 829 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 UGT2B11O75310 529 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 NME6O75414 186 aaPredicted RBP11.12□□□□□ -0.63
SNHG4-206ENST00000508735 KRT38O76015 456 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 PCSK2P16519 638 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 CTSSP25774 331 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 ECHS1P30084 290 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 HSD17B3P37058 310 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 ALDH9A1P49189 494 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 EMDP50402 254 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 MRPS35P82673 323 aaKnown RBP11.12□□□□□ -0.63
SNHG4-206ENST00000508735 DAZAP2Q15038 168 aaPredicted RBP11.12□□□□□ -0.63
SNHG4-206ENST00000508735 SF3B4Q15427 424 aaKnown RBP eCLIP11.12□□□□□ -0.632e-41■■□□□ 12.2
SNHG4-206ENST00000508735 TAOK1Q7L7X3 1001 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 TGIF2LYQ8IUE0 185 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 WDSUB1Q8N9V3 476 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 C9orf106Q8NAJ2 232 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 GOT1L1Q8NHS2 421 aaPredicted RBP11.12□□□□□ -0.63
SNHG4-206ENST00000508735 UHMK1Q8TAS1 419 aaKnown RBP11.12□□□□□ -0.63
SNHG4-206ENST00000508735 LINC01560Q8TB33 94 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 IFT81Q8WYA0 676 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 CALHM2Q9HA72 323 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 KLRF1Q9NZS2 232 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 JKAMPQ9P055 326 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 FETUBQ9UGM5 382 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 TRPS1Q9UHF7 1281 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 FOXD3Q9UJU5 478 aaPredicted RBP11.12□□□□□ -0.63
SNHG4-206ENST00000508735 SNX6Q9UNH7 406 aa11.12□□□□□ -0.63
SNHG4-206ENST00000508735 MAP1AP78559 2803 aaPredicted RBP11.12□□□□□ -0.63
SNHG4-206ENST00000508735 PRAMEF25A6NGN4 478 aa11.11□□□□□ -0.63
SNHG4-206ENST00000508735 FRG2CA6NGY1 282 aa11.11□□□□□ -0.63
SNHG4-206ENST00000508735 TUBAL3A6NHL2 446 aa11.11□□□□□ -0.63
SNHG4-206ENST00000508735 EEF1E1-BLOC1S5C9J1V9 151 aa11.11□□□□□ -0.63
SNHG4-206ENST00000508735 MANBAO00462 879 aa11.11□□□□□ -0.63
SNHG4-206ENST00000508735 ACOX3O15254 700 aa11.11□□□□□ -0.63
SNHG4-206ENST00000508735 EEF1E1O43324 174 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms