RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 REPS1Q96D71 796 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 PHF21BQ96EK2 531 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 CNRIP1Q96F85 164 aaPredicted RBP5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 ZNF597Q96LX8 424 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 ZNF681Q96N22 645 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 NODALQ96S42 347 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 SECISBP2Q96T21 854 aaKnown RBP5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 SERPINI1Q99574 410 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 FOXC2Q99958 501 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 CENPKQ9BS16 269 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 G6PC3Q9BUM1 346 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 UGT2B28Q9BY64 529 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 POLDIP3Q9BY77 421 aaKnown RBP5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 RAB17Q9H0T7 212 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 VPS11Q9H270 941 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 GALNT9Q9HCQ5 603 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 DLL4Q9NR61 685 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 MAT2BQ9NZL9 334 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 JKAMPQ9P055 326 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 B4GALT7Q9UBV7 327 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 DMGDHQ9UI17 866 aaKnown RBP5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 ST6GALNAC2Q9UJ37 374 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 ADAM29Q9UKF5 820 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 CBLCQ9ULV8 474 aa5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 TNPO3Q9Y5L0 923 aaKnown RBP5.87□□□□□ -1.47
HMGN1P16-201ENST00000508308 JMJD1CQ15652 2540 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 FN1P02751 2386 aaKnown RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 ROS1P08922 2347 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 MBD3L4A6NDZ8 208 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 MBD3L3A6NE82 208 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 MBD3L5A6NJ08 208 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 CD8B2A6NJW9 211 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 A6NNC1 897 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 C17orf51A8MQB3 221 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 STX16-NPEPL1H3BU86 382 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 STX16O14662 325 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 TP53I11O14683 189 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 GNB5O14775 395 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 ICOSLGO75144 302 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 UGT2B11O75310 529 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 PPM1BO75688 479 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 TRAPPC6AO75865 159 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 SNX4O95219 450 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 PDYNP01213 254 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 ATP1B1P05026 303 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 RPS17P08708 135 aaKnown RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 CD99P14209 185 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 CHN1P15882 459 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 PORP16435 677 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 TSPAN8P19075 237 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 KLK2P20151 261 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 GCAP28676 217 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 CASQ1P31415 396 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 UQCRC1P31930 480 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 FEN1P39748 380 aaKnown RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 EMDP50402 254 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 SERPINB8P50452 374 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 ASCL1P50553 236 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 CCNG1P51959 295 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 CDH13P55290 713 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 LTB4RQ15722 352 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 UAP1Q16222 522 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 PRSS53Q2L4Q9 553 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 KRTAP21-3Q3LHN1 58 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 GGTA1PQ4G0N0 100 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 FLYWCH1Q4VC44 716 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 TRMT12Q53H54 448 aaKnown RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 SGO1Q5FBB7 561 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 TCHHL1Q5QJ38 904 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 TBCELQ5QJ74 424 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 CCNYL2Q5T2Q4 361 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 TMEM198Q66K66 360 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 TMEM81Q6P7N7 255 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 COMMD6Q7Z4G1 85 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 YRDCQ86U90 279 aaKnown RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 RELL1Q8IUW5 271 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 LACC1Q8IV20 430 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 LIX1Q8N485 282 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 C9orf106Q8NAJ2 232 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 FAM83FQ8NEG4 500 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 ADCY4Q8NFM4 1077 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 MYRIPQ8NFW9 859 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 OR7G1Q8NGA0 311 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 MBD3L2Q8NHZ7 208 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 TRPC4APQ8TEL6 797 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 ZNF483Q8TF39 744 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 DCAKDQ8WVC6 231 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 NINJ1Q92982 152 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 RNASE6Q93091 150 aaKnown RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 TMEM41AQ96HV5 264 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 HBEGFQ99075 208 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 C1QTNF3Q9BXJ4 246 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 ITPAQ9BY32 194 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 CLEC4MQ9H2X3 399 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 EPB41L4BQ9H329 900 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 CDC42EP4Q9H3Q1 356 aaKnown RBP5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 ANKRA2Q9H9E1 313 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 WDR41Q9HAD4 459 aa5.86□□□□□ -1.47
HMGN1P16-201ENST00000508308 SLC24A3Q9HC58 644 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms