RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 ZNF730Q6ZMV8 503 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 Q6ZTC4 211 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 SMIM5Q71RC9 77 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 OR4N5Q8IXE1 308 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 MRPL43Q8N983 215 aaKnown RBP5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 WDSUB1Q8N9V3 476 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 C11orf45Q8TAV5 145 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 TMEM186Q96B77 213 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 RAB39BQ96DA2 213 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 ATXN7L3BQ96GX2 97 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 RPGRIP1Q96KN7 1286 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 OPRPNQ99935 248 aaPredicted RBP5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 C1orf21Q9H246 121 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 SLC26A1Q9H2B4 701 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 CD209Q9NNX6 404 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 NDE1Q9NXR1 346 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 TECRQ9NZ01 308 aaKnown RBP5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 NINJ2Q9NZG7 142 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 FAM153AQ9UHL3 310 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 SMC3Q9UQE7 1217 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 KIF3AQ9Y496 699 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 CACNA1SQ13698 1873 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 LRRC37AA6NMS7 1700 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 LTBP1Q14766 1721 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 KIAA1551Q9HCM1 1747 aa5.59□□□□□ -1.51
COL6A4P1-204ENST00000508169 COL4A1P02462 1669 aa5.59□□□□□ -1.52
COL6A4P1-204ENST00000508169 NID2Q14112 1375 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 CHEK1O14757 476 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 ARHGEF9O43307 516 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 KRT86O43790 486 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 KIAA0513O60268 411 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 CSDE1O75534 798 aaKnown RBP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 SYT1P21579 422 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 PKLRP30613 574 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 TNFRSF4P43489 277 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 TMEM50BP56557 158 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 BPIFB3P59826 476 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 SSTP61278 116 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 IRX3P78415 501 aaPredicted RBP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 MECOMQ03112 1051 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 RBBP4Q09028 425 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 KIAA0141Q14154 515 aaPredicted RBP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 KRT81Q14533 505 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 KLHL40Q2TBA0 621 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 MOGAT2Q3SYC2 334 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 CCDC40Q4G0X9 1142 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 TOR1AIP1Q5JTV8 583 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 TAF8Q7Z7C8 310 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 WDR49Q8IV35 697 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 METTL4Q8N3J2 472 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 OR52B6Q8NGF0 335 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 OR6F1Q8NGZ6 308 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 GOLGA5Q8TBA6 731 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 TRIM44Q96DX7 344 aaPredicted RBP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 NAF1Q96HR8 494 aaKnown RBP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 NSMCE2Q96MF7 247 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 RAB40CQ96S21 281 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 SPAG8Q99932 426 aaPredicted RBP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 ZSCAN16Q9H4T2 348 aaPredicted RBP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 SPASTQ9UBP0 616 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 COPS7AQ9UBW8 275 aa5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 HOOK1Q9UJC3 728 aaKnown RBP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 ERRFI1Q9UJM3 462 aaPredicted RBP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 PIN4Q9Y237 131 aaKnown RBP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 TNRC6CQ9HCJ0 1690 aaKnown RBP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 MYO5AQ9Y4I1 1855 aaKnown RBP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 COL1A1P02452 1464 aaPredicted RBP5.58□□□□□ -1.52
COL6A4P1-204ENST00000508169 GAKO14976 1311 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 SH3PXD2BA1X283 911 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 CFAP73A6NFT4 308 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 YJEFN3A6XGL0 299 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 KPNA7A9QM74 516 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 TFECO14948 347 aaPredicted RBP5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 NME2P1O60361 137 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 CSO75390 466 aaKnown RBP5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 CXCL10P02778 98 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 PGK2P07205 417 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 SELEP16581 610 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 ACP1P24666 158 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 FCGR2BP31994 310 aaPredicted RBP5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 FCGR2CP31995 323 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 CRYBA2P53672 197 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 CALCOCO2Q13137 446 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 GAMTQ14353 236 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 FASTKD3Q14CZ7 662 aaKnown RBP5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 TRADDQ15628 312 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 MLF2Q15773 248 aaPredicted RBP5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 GPAT3Q53EU6 434 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 HERC4Q5GLZ8 1057 aaPredicted RBP5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 GFI1BQ5VTD9 330 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 C1orf189Q5VU69 101 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 RTL6Q6ICC9 239 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 WDR88Q6ZMY6 472 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 KDM8Q8N371 416 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 PARP8Q8N3A8 854 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 TCP11Q8WWU5 503 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 MRPL24Q96A35 216 aaKnown RBP5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 ESAMQ96AP7 390 aa5.57□□□□□ -1.52
COL6A4P1-204ENST00000508169 AGAP4Q96P64 663 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms