RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CTBP1Q13363 440 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 IQCB1Q15051 598 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 GUSBP1Q15486 140 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 PCID2Q5JVF3 399 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 DEPDC1Q5TB30 811 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 DUPD1Q68J44 220 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 CASC4Q6P4E1 433 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 NXPE4Q6UWF7 544 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 DEF8Q6ZN54 512 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 USP43Q70EL4 1123 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 CPNE9Q8IYJ1 553 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 KATNAL2Q8IYT4 538 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 FBXL20Q96IG2 436 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 GPR21Q99679 349 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 BPESC1Q9GZL8 116 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 REXO4Q9GZR2 422 aaKnown RBP6.41□□□□□ -1.38
VCAN-207ENST00000507162 STMN4Q9H169 189 aaPredicted RBP6.41□□□□□ -1.38
VCAN-207ENST00000507162 NUP62CLQ9H1M0 184 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 CCDC68Q9H2F9 335 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 GOLPH3Q9H4A6 298 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 PARVBQ9HBI1 364 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 XPR1Q9UBH6 696 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 FBXL2Q9UKC9 423 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 DHRS7Q9Y394 339 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 ZNF175Q9Y473 711 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 MAD1L1Q9Y6D9 718 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.41□□□□□ -1.38
VCAN-207ENST00000507162 SPACA6W5XKT8 324 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 LOC390937A0A1W2PQ73 354 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 CTAGE9A4FU28 777 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 OR6C76A6NM76 312 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 H7C417 338 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 ZIC3O60481 467 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 GUCA1CO95843 209 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 HKR1P10072 659 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 ALOX15P16050 662 aaPredicted RBP6.4□□□□□ -1.38
VCAN-207ENST00000507162 CNTFP26441 200 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 PTGDSP41222 190 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 SLC6A8P48029 635 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 MARCKSL1P49006 195 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 RPS3AP61247 264 aaKnown RBP6.4□□□□□ -1.38
VCAN-207ENST00000507162 PLIN5Q00G26 463 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 CHRNB3Q05901 458 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 KIF5AQ12840 1032 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 STK11Q15831 433 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 SLC22A25Q6T423 547 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 TMPRSS11BQ86T26 416 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 PLCZ1Q86YW0 608 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 RHOT2Q8IXI1 618 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 ZNF540Q8NDQ6 660 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 OR2L5Q8NG80 312 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 OR5M1Q8NGP8 315 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 OR56A3Q8NH54 315 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 EEF1AKMT1Q8WVE0 214 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 RIT1Q92963 219 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 PEX13Q92968 403 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 KISS1RQ969F8 398 aaPredicted RBP6.4□□□□□ -1.38
VCAN-207ENST00000507162 CCT8L2Q96SF2 557 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 TCF12Q99081 682 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 TRMOQ9BU70 441 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 HSD3B7Q9H2F3 369 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 CDC42EP4Q9H3Q1 356 aaKnown RBP6.4□□□□□ -1.38
VCAN-207ENST00000507162 PELI2Q9HAT8 420 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 ETNK1Q9HBU6 452 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 EHD3Q9NZN3 535 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 NENFQ9UMX5 172 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 USP22Q9UPT9 525 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.4□□□□□ -1.38
VCAN-207ENST00000507162 ZNF337Q9Y3M9 751 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 FKBP7Q9Y680 259 aa6.4□□□□□ -1.38
VCAN-207ENST00000507162 ANKDD1BA6NHY2 528 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 EFCAB8A8MWE9 144 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 H3BML4 177 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 ADAP00813 363 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 PTMAP06454 111 aaKnown RBP6.39□□□□□ -1.39
VCAN-207ENST00000507162 C8GP07360 202 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 RHOXF2BP0C7M4 288 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 FCGR2AP12318 317 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 TPSB2P20231 275 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 IL11P20809 199 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 EPHA1P21709 976 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 ABCD3P28288 659 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 SSTR4P31391 388 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 CHN2P52757 468 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 ARFIP2P53365 341 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 DVL1P1P54792 670 aaPredicted RBP6.39□□□□□ -1.39
VCAN-207ENST00000507162 GDF10P55107 478 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 CLDN20P56880 219 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 TGM3Q08188 693 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 P2RY6Q15077 328 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 PPA1Q15181 289 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 TPSAB1Q15661 275 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 NNATQ16517 81 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 SFRP5Q5T4F7 317 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 RAET1LQ5VY80 246 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 UGT3A1Q6NUS8 523 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 TMIGD1Q6UXZ0 262 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 Q6ZSR9 355 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 CENPUQ71F23 418 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 NUP54Q7Z3B4 507 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms