RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 HEMK1Q9Y5R4 338 aaPredicted RBP7.85□□□□□ -1.15
PDGFC-205ENST00000506880 PTGDR2Q9Y5Y4 395 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 POLEQ07864 2286 aa7.85□□□□□ -1.15
PDGFC-205ENST00000506880 A0A0G2JND7 137 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 A0A1W2PP18 115 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 GLOD5A6NK44 160 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 A8MVJ9 347 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 KLRC4-KLRK1H3BQV0 150 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 SNX3O60493 162 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 SCN2BO60939 215 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 ITGA10O75578 1167 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 DCTN3O75935 186 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 DNAJB5O75953 348 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 SNX4O95219 450 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 CBX7O95931 251 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 FAM107AO95990 144 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 CRYABP02511 175 aaKnown RBP7.84□□□□□ -1.15
PDGFC-205ENST00000506880 ABCB1P08183 1280 aaPredicted RBP7.84□□□□□ -1.15
PDGFC-205ENST00000506880 FBXO45P0C2W1 286 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 GPX3P22352 226 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 PRDX6P30041 224 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 GPC1P35052 558 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 KRT20P35900 424 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 FEN1P39748 380 aaKnown RBP7.84□□□□□ -1.15
PDGFC-205ENST00000506880 EMDP50402 254 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 TNFSF10P50591 281 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 MNAT1P51948 309 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 PNLIPRP2P54317 469 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 STX5Q13190 355 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 NTRK2Q16620 822 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 MAPKAPK3Q16644 382 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.84□□□□□ -1.15
PDGFC-205ENST00000506880 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.84□□□□□ -1.15
PDGFC-205ENST00000506880 FAM174BQ3ZCQ3 159 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 EXOSC6Q5RKV6 272 aaKnown RBP7.84□□□□□ -1.15
PDGFC-205ENST00000506880 FAM91A1Q658Y4 838 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 FAAH2Q6GMR7 532 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 CDC73Q6P1J9 531 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 NUP54Q7Z3B4 507 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 SPATA21Q7Z572 469 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 MISPQ8IVT2 679 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 SLC34A3Q8N130 599 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 TMEM156Q8N614 296 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 C16orf52Q8NHV5 167 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 ASB15Q8WXK1 588 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 SPACA9Q96E40 222 aaPredicted RBP7.84□□□□□ -1.15
PDGFC-205ENST00000506880 NEURL3Q96EH8 262 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 SLC35A4Q96G79 324 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 OR52B2Q96RD2 323 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 OR52E6Q96RD3 313 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 SH3GL1Q99961 368 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 C1orf50Q9BV19 199 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 NUDT9Q9BW91 350 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 ACTRT3Q9BYD9 372 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 HOXD1Q9GZZ0 328 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 ZNF385DQ9H6B1 395 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 WDR55Q9H6Y2 383 aaPredicted RBP7.84□□□□□ -1.15
PDGFC-205ENST00000506880 EVA1AQ9H8M9 152 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 HPF1Q9NWY4 346 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 CALML5Q9NZT1 146 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 BAIAP2L1Q9UHR4 511 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 VPS4AQ9UN37 437 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 FAF1Q9UNN5 650 aaPredicted RBP7.84□□□□□ -1.15
PDGFC-205ENST00000506880 LIPT1Q9Y234 373 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 NDUFAF1Q9Y375 327 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 NBEAQ8NFP9 2946 aa7.84□□□□□ -1.15
PDGFC-205ENST00000506880 PRRC2CQ9Y520 2896 aaKnown RBP7.84□□□□□ -1.15
PDGFC-205ENST00000506880 PCSK5Q92824 1860 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 C15orf38-AP3S2A0A0A6YYH1 394 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 UPK1AO00322 258 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 RFXANKO14593 260 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 KALRNO60229 2985 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 HS6ST1O60243 411 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 NKX2-2O95096 273 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 KCNH1O95259 989 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 LAMP1P11279 417 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 ELAVL4P26378 380 aaKnown RBP7.83□□□□□ -1.16
PDGFC-205ENST00000506880 CCT3P49368 545 aaKnown RBP7.83□□□□□ -1.16
PDGFC-205ENST00000506880 WNT3P56703 355 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 ARG2P78540 354 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF169Q14929 603 aaPredicted RBP7.83□□□□□ -1.16
PDGFC-205ENST00000506880 DECR1Q16698 335 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 HYAL4Q2M3T9 481 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF791Q3KP31 576 aaPredicted RBP7.83□□□□□ -1.16
PDGFC-205ENST00000506880 SPATS1Q496A3 300 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 LRIF1Q5T3J3 769 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 ATP1A1-AS1Q5TC04 95 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 SLC30A6Q6NXT4 461 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 GK5Q6ZS86 529 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 ARPINQ7Z6K5 226 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 SLC30A8Q8IWU4 369 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 OR4N5Q8IXE1 308 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 C9orf40Q8IXQ3 194 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 TEX19Q8NA77 164 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 PCYOX1LQ8NBM8 494 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 MDS2Q8NDY4 140 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 NUP43Q8NFH3 380 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 OR7A2PQ8NGA2 310 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 OR9A2Q8NGT5 310 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 CDC26Q8NHZ8 85 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms