RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ADAP2Q9NPF8 381 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 HCN3Q9P1Z3 774 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 WNT16Q9UBV4 365 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 KCND3Q9UK17 655 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 MRPS17Q9Y2R5 130 aaKnown RBP11.43□□□□□ -0.58
LIN54-206ENST00000506560 KLK4Q9Y5K2 254 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 AGRPO00253 132 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 UGT2B11O75310 529 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 CPMP14384 443 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 DDX5P17844 614 aaKnown RBP11.43□□□□□ -0.58
LIN54-206ENST00000506560 NR4A1P22736 598 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 KRT20P35900 424 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 CRISP3P54108 245 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 PRR5P85299 388 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 KCNAB1Q14722 419 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 MAD2L1BPQ15013 274 aaPredicted RBP11.43□□□□□ -0.58
LIN54-206ENST00000506560 NPTX1Q15818 432 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 ZNF770Q6IQ21 691 aaPredicted RBP11.43□□□□□ -0.58
LIN54-206ENST00000506560 ARMC6Q6NXE6 501 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 CCDC103Q8IW40 242 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 ARHGEF39Q8N4T4 335 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 OR56A1Q8NGH5 318 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 SFXN5Q8TD22 340 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 TGM7Q96PF1 710 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 CCDC90BQ9GZT6 254 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 LHPPQ9H008 270 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 SEMA6CQ9H3T2 930 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 CXorf21Q9HAI6 301 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 A4GNTQ9UNA3 340 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 RNF6Q9Y252 685 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 NPIPA5A0A0B4J1W7 369 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 FAM221BA6H8Z2 402 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 NPIPA7E9PJI5 369 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 TGFBR3LH3BV60 316 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 K7ESF4 209 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 SOX14O95416 240 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 PDGFBP01127 241 aaPredicted RBP11.42□□□□□ -0.58
LIN54-206ENST00000506560 NPIPA8P0DM63 369 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 ELAVL4P26378 380 aaKnown RBP11.42□□□□□ -0.58
LIN54-206ENST00000506560 MAP2K4P45985 399 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 IDH2P48735 452 aaKnown RBP11.42□□□□□ -0.58
LIN54-206ENST00000506560 MVKQ03426 396 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 BNIP3Q12983 259 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 KEAP1Q14145 624 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 DUSP5Q16690 384 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 MLIPQ5VWP3 458 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 MFSD12Q6NUT3 480 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 MCATQ8IVS2 390 aaKnown RBP11.42□□□□□ -0.58
LIN54-206ENST00000506560 PARP8Q8N3A8 854 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 ZNF607Q96SK3 696 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 DGCR6LQ9BY27 220 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 GABARAPL3Q9BY60 117 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 CHRDQ9H2X0 955 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 CAPN10Q9HC96 672 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 NDUFA13Q9P0J0 144 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 RSL24D1Q9UHA3 163 aaKnown RBP11.42□□□□□ -0.58
LIN54-206ENST00000506560 PHF11Q9UIL8 331 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 PSME2Q9UL46 239 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 TMEM184BQ9Y519 407 aaPredicted RBP11.42□□□□□ -0.58
LIN54-206ENST00000506560 IGHV5-51A0A0C4DH38 117 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 AQP9O43315 295 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 ZBTB11O95625 1053 aaPredicted RBP11.42□□□□□ -0.58
LIN54-206ENST00000506560 ACP2P11117 423 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 ITGA2P17301 1181 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 CBLP22681 906 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 ALDH4A1P30038 563 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 PPP2R1BP30154 601 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 HMGA2P52926 109 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 NUDT6P53370 316 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 ELOCQ15369 112 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 ZBED5Q49AG3 693 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 RBM48Q5RL73 367 aaKnown RBP11.42□□□□□ -0.58
LIN54-206ENST00000506560 PRAMEF17Q5VTA0 474 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 BORAQ6PGQ7 559 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 ZC3H14Q6PJT7 736 aaKnown RBP11.42□□□□□ -0.58
LIN54-206ENST00000506560 SLC30A8Q8IWU4 369 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 TAGAPQ8N103 731 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 CLIP4Q8N3C7 705 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 SPEM1Q8N4L4 309 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 FAM81AQ8TBF8 368 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 SLC7A13Q8TCU3 470 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 PIK3R3Q92569 461 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 ISOC1Q96CN7 298 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 HRASLS5Q96KN8 279 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 SLC38A3Q99624 504 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 PITX2Q99697 317 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 ZSCAN32Q9NX65 697 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 CLCA2Q9UQC9 943 aa11.42□□□□□ -0.58
LIN54-206ENST00000506560 TMEM247A6NEH6 219 aa11.41□□□□□ -0.58
LIN54-206ENST00000506560 HRKO00198 91 aa11.41□□□□□ -0.58
LIN54-206ENST00000506560 ZSCAN9O15535 394 aaPredicted RBP11.41□□□□□ -0.58
LIN54-206ENST00000506560 ABCB7O75027 752 aa11.41□□□□□ -0.58
LIN54-206ENST00000506560 INMTO95050 263 aa11.41□□□□□ -0.58
LIN54-206ENST00000506560 CCNB2O95067 398 aa11.41□□□□□ -0.58
LIN54-206ENST00000506560 PROS1P07225 676 aa11.41□□□□□ -0.58
LIN54-206ENST00000506560 CAPZBP47756 277 aa11.41□□□□□ -0.58
LIN54-206ENST00000506560 FASLGP48023 281 aa11.41□□□□□ -0.58
LIN54-206ENST00000506560 NXPH1P58417 271 aa11.41□□□□□ -0.58
LIN54-206ENST00000506560 ZNF628Q5EBL2 1059 aa11.41□□□□□ -0.58
LIN54-206ENST00000506560 BROXQ5VW32 411 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms