RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 BTCP35070 178 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 MTNR1AP48039 350 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 GIPRP48546 466 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 MAP2K6P52564 334 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 DHODHQ02127 395 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 SEMG2Q02383 582 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 DBPQ10586 325 aaPredicted RBP15.03■□□□□ -0
SCLT1-208ENST00000506368 PUM1Q14671 1186 aaKnown RBP eCLIP15.03■□□□□ -0
SCLT1-208ENST00000506368 CCDC85BQ15834 202 aaPredicted RBP15.03■□□□□ -0
SCLT1-208ENST00000506368 NHLRC3Q5JS37 347 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 BHLHB9Q6PI77 547 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 LINC00518Q8N0U6 118 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 ZBTB44Q8NCP5 570 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 HASPINQ8TF76 798 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 GATAD2BQ8WXI9 593 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 PPCDCQ96CD2 204 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 PKP4Q99569 1192 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 JAM3Q9BX67 310 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 BTBD1Q9H0C5 482 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 A4GALTQ9NPC4 353 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 DLL4Q9NR61 685 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 SDHAF2Q9NX18 166 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 AFF4Q9UHB7 1163 aaKnown RBP15.03■□□□□ -0
SCLT1-208ENST00000506368 KLF15Q9UIH9 416 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 EXO1Q9UQ84 846 aaKnown RBP15.03■□□□□ -0
SCLT1-208ENST00000506368 BAIAP2Q9UQB8 552 aa15.03■□□□□ -0
SCLT1-208ENST00000506368 ANKDD1BA6NHY2 528 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 TMEM189-UBE2V1I3L0A0 370 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 INPPL1O15357 1258 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 C6orf47O95873 294 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 TP53P04637 393 aaPredicted RBP15.02■□□□□ -0
SCLT1-208ENST00000506368 OR4Q2P0C623 313 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 NPR2P20594 1047 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 UQCRC2P22695 453 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 RHOAP61586 193 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 PITPNAQ00169 270 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 CHRNA6Q15825 494 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 OR2G6Q5TZ20 316 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 SDHAF4Q5VUM1 108 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 ZDHHC20Q5W0Z9 365 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 SLC22A10Q63ZE4 541 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 TCTN3Q6NUS6 607 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 ZNF852Q6ZMS4 543 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 OR5T2Q8NGG2 359 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 LILRB1Q8NHL6 650 aaPredicted RBP15.02■□□□□ -0
SCLT1-208ENST00000506368 WBP1Q96G27 269 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 B3GALT6Q96L58 329 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 COQ10AQ96MF6 247 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 SLC38A2Q96QD8 506 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 RNF32Q9H0A6 362 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 SGK2Q9HBY8 427 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 IFT46Q9NQC8 304 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 IMP3Q9NV31 184 aaKnown RBP15.02■□□□□ -0
SCLT1-208ENST00000506368 COQ3Q9NZJ6 369 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 NOD1Q9Y239 953 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 KCNMB2Q9Y691 235 aa15.02■□□□□ -0
SCLT1-208ENST00000506368 A0A1W2PRQ8 180 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 KDM4EB2RXH2 506 aaPredicted RBP15.02□□□□□ -0.01
SCLT1-208ENST00000506368 SOCS5O75159 536 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 CD53P19397 219 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 ITPKAP23677 461 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 CCR7P32248 378 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 CAV3P56539 151 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 C2orf80Q0P641 193 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 LRRC32Q14392 662 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 GINS1Q14691 196 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 ENTPD8Q5MY95 495 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 SHEQ5VZ18 495 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 BAIAP2L2Q6UXY1 529 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 TPGS1Q6ZTW0 290 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 ABI3BPQ7Z7G0 1075 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 KLHL36Q8N4N3 616 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 OR56B4Q8NH76 319 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 CEP76Q8TAP6 659 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 SLC9A6Q92581 669 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 PLD4Q96BZ4 506 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 ZNF354BQ96LW1 612 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 MTERF1Q99551 399 aaKnown RBP15.02□□□□□ -0.01
SCLT1-208ENST00000506368 SLC7A5P2Q9GIP4 190 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 RERGLQ9H628 205 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 RHCGQ9UBD6 479 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 POMT2Q9UKY4 750 aa15.02□□□□□ -0.01
SCLT1-208ENST00000506368 IGLV3-16A0A075B6K0 115 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 SGTAO43765 313 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 NME6O75414 186 aaPredicted RBP15.01□□□□□ -0.01
SCLT1-208ENST00000506368 PRAMEF12O95522 483 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 CTSHP09668 335 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 FURINP09958 794 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 LIMS3P0CW19 117 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 LIMS4P0CW20 117 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 MAPK9P45984 424 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 S100A12P80511 92 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 DOC2AQ14183 400 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 SLC5A12Q1EHB4 618 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 BTN2A1Q7KYR7 527 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 ANKRD33Q7Z3H0 272 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 SERINC5Q86VE9 423 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 ADGRG2Q8IZP9 1017 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 POGLUT1Q8NBL1 392 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 KCT2Q8NC54 265 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms