RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 TRIM64A6NGJ6 449 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 TRIM64BA6NI03 449 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 CHEK1O14757 476 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 PDE5AO76074 875 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 GJB5O95377 273 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 SYNGR4O95473 234 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 PRAMEF12O95522 483 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 ABHD2P08910 425 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 PVRP15151 417 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 PGAM2P15259 253 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 CYP11B1P15538 503 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 MARCKSP29966 332 aaPredicted RBP2.78□□□□□ -1.96
CHD1-203ENST00000505657 SLC25A1P53007 311 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 RAG2P55895 527 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 GFPT1Q06210 699 aaPredicted RBP2.78□□□□□ -1.96
CHD1-203ENST00000505657 GSG1Q2KHT4 349 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 KRTAP13-3Q3SY46 172 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 HIST2H2AA3Q6FI13 130 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 ATRAIDQ6UW56 229 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 MFSD7Q6UXD7 560 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 STOX1Q6ZVD7 989 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 UNC5CLQ8IV45 518 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 PYROXD2Q8N2H3 581 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 CHCHD4Q8N4Q1 142 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 ZNF525Q8N782 197 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 MGARPQ8TDB4 240 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 LHX4Q969G2 390 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 VSIG2Q96IQ7 327 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 APOOQ9BUR5 198 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 TRIM9Q9C026 710 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 TRPV6Q9H1D0 765 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 TSPY26PQ9H489 355 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 PRMT8Q9NR22 394 aaPredicted RBP2.78□□□□□ -1.96
CHD1-203ENST00000505657 CYP39A1Q9NYL5 469 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 COPS7AQ9UBW8 275 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 MIOXQ9UGB7 285 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 TRMT6Q9UJA5 497 aaKnown RBP2.78□□□□□ -1.96
CHD1-203ENST00000505657 ENTPD4Q9Y227 616 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 SLC9A8Q9Y2E8 581 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 ZNF256Q9Y2P7 627 aaPredicted RBP2.78□□□□□ -1.96
CHD1-203ENST00000505657 RNF115Q9Y4L5 304 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 SYNJ2O15056 1496 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 DHX29Q7Z478 1369 aaKnown RBP2.77□□□□□ -1.97
CHD1-203ENST00000505657 A0A0U1RRA0 63 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 HAT1O14929 419 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 DUSP14O95147 198 aaKnown RBP2.77□□□□□ -1.97
CHD1-203ENST00000505657 ALPIP09923 528 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 ATP6V1B1P15313 513 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 PTPN4P29074 926 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 FNTAP49354 379 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 ARHGDIBP52566 201 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 LYZP61626 148 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 CCZ1BP86790 482 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 CCZ1P86791 482 aaPredicted RBP2.77□□□□□ -1.97
CHD1-203ENST00000505657 PAN3Q58A45 887 aaKnown RBP2.77□□□□□ -1.97
CHD1-203ENST00000505657 SLC10A5Q5PT55 438 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 DLEU7Q6UYE1 221 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 TEX13BQ9BXU2 312 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 VNN3Q9NY84 501 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 IL17CQ9P0M4 197 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 MTRRQ9UBK8 725 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 FAM153AQ9UHL3 310 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 CLEC4EQ9ULY5 219 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 MOKQ9UQ07 419 aa2.77□□□□□ -1.97
CHD1-203ENST00000505657 ATRXP46100 2492 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 MFSD2BA6NFX1 497 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 A8MX80 341 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 EI24O14681 340 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 OLFM2O95897 454 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 ECDO95905 644 aaPredicted RBP2.76□□□□□ -1.97
CHD1-203ENST00000505657 SNRPCP09234 159 aaKnown RBP2.76□□□□□ -1.97
CHD1-203ENST00000505657 HIST1H2AGP0C0S8 130 aaPredicted RBP2.76□□□□□ -1.97
CHD1-203ENST00000505657 ZCCHC18P0CG32 403 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 IGFBP5P24593 272 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 OR1D4P47884 311 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 SGSHP51688 502 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 HNRNPFP52597 415 aaKnown RBP2.76□□□□□ -1.97
CHD1-203ENST00000505657 SRP54P61011 504 aaKnown RBP2.76□□□□□ -1.97
CHD1-203ENST00000505657 ZNF79Q15937 498 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 ZNF699Q32M78 642 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 C9orf129Q5T035 196 aaKnown RBP2.76□□□□□ -1.97
CHD1-203ENST00000505657 LIPKQ5VXJ0 399 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 ADGRD2Q7Z7M1 963 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 AMZ2Q86W34 360 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.76□□□□□ -1.97
CHD1-203ENST00000505657 UNC45BQ8IWX7 931 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 FBXO16Q8IX29 292 aaPredicted RBP2.76□□□□□ -1.97
CHD1-203ENST00000505657 ARL10Q8N8L6 244 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 Q8N9G6 341 aaPredicted RBP2.76□□□□□ -1.97
CHD1-203ENST00000505657 SPC24Q8NBT2 197 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 TMEM185AQ8NFB2 350 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 PSMA8Q8TAA3 256 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 RFESDQ8TAC1 157 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 FNDC8Q8TC99 324 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 TMEM37Q8WXS4 190 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 HIST1H2ACQ93077 130 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 TMEM45BQ96B21 275 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 ZNF414Q96IQ9 312 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 ZIM3Q96PE6 472 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 ALG9Q9H6U8 611 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms