RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CELA2AP08217 269 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 COX7A2P14406 83 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 NID1P14543 1247 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 PIGAP37287 484 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 CRYBA2P53672 197 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 SLC13A2Q13183 592 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 AMER2Q8N7J2 671 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 ITCHQ96J02 903 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 SLC25A23Q9BV35 468 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZNF350Q9GZX5 532 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 PIGUQ9H490 435 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 DCTN4Q9UJW0 460 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 NDUFAF1Q9Y375 327 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 FIS1Q9Y3D6 152 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZNF451Q9Y4E5 1061 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 PCDHB14Q9Y5E9 798 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 HMGN4O00479 90 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 FADS1O60427 444 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 GCM2O75603 506 aaPredicted RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 DCTN3O75935 186 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 NEURL1O76050 574 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 IL33O95760 270 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 C6orf47O95873 294 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 IGKV1D-16P01601 117 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 SEMG1P04279 462 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 ACTN3Q08043 901 aaPredicted RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 REP15Q6BDI9 236 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 BORAQ6PGQ7 559 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 OR52N2Q8NGI0 321 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 CLHC1Q8NHS4 586 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 PAQR8Q8TEZ7 354 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 C8orf44Q96CB5 159 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 MARK4Q96L34 752 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 PRPF18Q99633 342 aaKnown RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 LPAR4Q99677 370 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 RBCK1Q9BYM8 510 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 KAT8Q9H7Z6 458 aaKnown RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 CPNE5Q9HCH3 593 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 LEF1Q9UJU2 399 aaPredicted RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 ABCG2Q9UNQ0 655 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 MRPS18CQ9Y3D5 142 aaKnown RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 NSG1A0A0A6YYJ2 146 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 A0A0G2JND7 137 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 OR6C70A6NIJ9 312 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 PDGFAP04085 211 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 TFPTP0C1Z6 253 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 NTSP30990 170 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 MC3RP41968 323 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 NCBP2P52298 156 aaKnown RBP eCLIP7.65□□□□□ -1.182e-12■■■□□ 16.2
CDC42SE2-208ENST00000505065 FADDQ13158 208 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 SNTA1Q13424 505 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZNF141Q15928 474 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 MLIPQ5VWP3 458 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 CCDC81Q6ZN84 652 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 Q6ZS92 163 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 PTOV1Q86YD1 416 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 OR4N5Q8IXE1 308 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 IKZF5Q9H5V7 419 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZNF160Q9HCG1 818 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 PRODH2Q9UF12 536 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 CFL2Q9Y281 166 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 C2orf92A0A1B0GVN3 265 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 CDC14CA4D256 554 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 TRIM3O75382 744 aaPredicted RBP7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 COX4I1P13073 169 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 CLCN2P51788 898 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 DGKQP52824 942 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 TCTN3Q6NUS6 607 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 MTDHQ86UE4 582 aaKnown RBP7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 PTRH1Q86Y79 214 aaKnown RBP7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 CCDC116Q8IYX3 515 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 IL22RA1Q8N6P7 574 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 CDRT4Q8N9R6 151 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 OR52R1Q8NGF1 315 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 TMEM125Q96AQ2 219 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 PPWD1Q96BP3 646 aaKnown RBP7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 ANKRD27Q96NW4 1050 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 ACTRT3Q9BYD9 372 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 VAPAQ9P0L0 249 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 ENTPD4Q9Y227 616 aa7.65□□□□□ -1.18
CDC42SE2-208ENST00000505065 ATXN7O15265 892 aaPredicted RBP7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 KIAA0513O60268 411 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 SSTR4P31391 388 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 FEN1P39748 380 aaKnown RBP7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 HLCSP50747 726 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 TUBA3CQ13748 450 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 ELOAQ14241 798 aaKnown RBP7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 MAPRE2Q15555 327 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 TRMT5Q32P41 509 aaKnown RBP7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 B3GNTL1Q67FW5 361 aaPredicted RBP7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 TUBA3EQ6PEY2 450 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 GK5Q6ZS86 529 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 GALNT16Q8N428 558 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 KIF2BQ8N4N8 673 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 EXD3Q8N9H8 876 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 FADS6Q8N9I5 356 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 SPPL2AQ8TCT8 520 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 EXOSC8Q96B26 276 aaKnown RBP7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 ATP13A2Q9NQ11 1180 aa7.65□□□□□ -1.19
CDC42SE2-208ENST00000505065 PLSCR2Q9NRY7 297 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms