RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	SMAD5	Q99717	465 aa	Known RBP	4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	PELO	Q9BRX2	385 aa	Known RBP	4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	LMF2	Q9BU23	707 aa	Known RBP	4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	KRTAP4-6	Q9BYQ5	205 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	FAM107B	Q9H098	131 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	ING2	Q9H160	280 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	OR10A5	Q9H207	317 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	PROK2	Q9HC23	129 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	NEUROD4	Q9HD90	331 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	PNO1	Q9NRX1	252 aa	Known RBP	4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	PTGFRN	Q9P2B2	879 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	MYOT	Q9UBF9	498 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	PSME2	Q9UL46	239 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	POLH	Q9Y253	713 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	PCDHB14	Q9Y5E9	798 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	CSAG2	Q9Y5P2	127 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	KCNE3	Q9Y6H6	103 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	ZNF780B	Q9Y6R6	833 aa		4.58	□□□□□ -1.68
LMNB1-208	ENST00000504788	FREM3	P0C091	2139 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	NIN	Q8N4C6	2090 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788		A0A096LPI6	279 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	NSG1	A0A0A6YYJ2	146 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	DYTN	A2CJ06	578 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	ARGFX	A6NJG6	315 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788		A8MUA0	341 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	TMEM229A	B2RXF0	380 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	RRP8	O43159	456 aa	Known RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	CCDC22	O60826	627 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	GCM2	O75603	506 aa	Predicted RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	NEURL1	O76050	574 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	UNC5C	O95185	931 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	IGKV1D-16	P01601	117 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	GSN	P06396	782 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	ACP2	P11117	423 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	GPX2	P18283	190 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	NCF2	P19878	526 aa	Predicted RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	S100A3	P33764	101 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	TRPC1	P48995	793 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	CRYBA2	P53672	197 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	UCN	P55089	124 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	MANF	P55145	182 aa	Known RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	CORO7	P57737	925 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	MLF1	P58340	268 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	AIMP2	Q13155	320 aa	Known RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	SELPLG	Q14242	412 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	ZNF267	Q14586	743 aa	Predicted RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	MYBPC3	Q14896	1274 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	EXT1	Q16394	746 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	FXN	Q16595	210 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	TBR1	Q16650	682 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	BTBD16	Q32M84	506 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	ZNF791	Q3KP31	576 aa	Predicted RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	AGK	Q53H12	422 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	RUNDC3A	Q59EK9	446 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	MFSD4B	Q5TF39	518 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	DESI1	Q6ICB0	168 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	HEPHL1	Q6MZM0	1159 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	TCTN3	Q6NUS6	607 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	IGFL3	Q6UXB1	125 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	ZAR1	Q86SH2	424 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	LGI4	Q8N135	537 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	GALNT16	Q8N428	558 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	EXD3	Q8N9H8	876 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	OR7G1	Q8NGA0	311 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	OR4N2	Q8NGD1	307 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	OR52R1	Q8NGF1	315 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	BRIX1	Q8TDN6	353 aa	Known RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	NEURL3	Q96EH8	262 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	VMP1	Q96GC9	406 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	C16orf58	Q96GQ5	468 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	DGAT2	Q96PD7	388 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	SLC39A3	Q9BRY0	314 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	ITPA	Q9BY32	194 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	TRIM8	Q9BZR9	551 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	OR8D2	Q9GZM6	311 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	WWTR1	Q9GZV5	400 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	NXF5	Q9H1B4	397 aa	Known RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	LIN28A	Q9H9Z2	209 aa	Known RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	ATAD3A	Q9NVI7	634 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	ARL8B	Q9NVJ2	186 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	FBXO34	Q9NWN3	711 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	KCNE5	Q9UJ90	142 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	TRIM33	Q9UPN9	1127 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	HRH3	Q9Y5N1	445 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	CLCA3P	Q9Y6N3	262 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	SHANK1	Q9Y566	2161 aa		4.57	□□□□□ -1.68
LMNB1-208	ENST00000504788	DSPP	Q9NZW4	1301 aa		4.56	□□□□□ -1.68
LMNB1-208	ENST00000504788	LOC100653049	A0A140TA62	436 aa		4.56	□□□□□ -1.68
LMNB1-208	ENST00000504788	CCDC154	A6NI56	674 aa		4.56	□□□□□ -1.68
LMNB1-208	ENST00000504788	OR6C76	A6NM76	312 aa		4.56	□□□□□ -1.68
LMNB1-208	ENST00000504788	NPIPB9	F8W1W9	429 aa		4.56	□□□□□ -1.68
LMNB1-208	ENST00000504788	HMGN4	O00479	90 aa		4.56	□□□□□ -1.68
LMNB1-208	ENST00000504788	NR5A2	O00482	541 aa		4.56	□□□□□ -1.68
LMNB1-208	ENST00000504788	EMC8	O43402	210 aa		4.56	□□□□□ -1.68
LMNB1-208	ENST00000504788	TSPAN2	O60636	221 aa		4.56	□□□□□ -1.68

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