RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 STT3BQ8TCJ2 826 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 SLC38A5Q8WUX1 472 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 APOBEC4Q8WW27 367 aaKnown RBP9.69□□□□□ -0.86
TPM3-217ENST00000504663 FIG4Q92562 907 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 COL26A1Q96A83 441 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 FKBP10Q96AY3 582 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 SLC35A4Q96G79 324 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 TMEM19Q96HH6 336 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 MAGED4Q96JG8 741 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 VSTM2LQ96N03 204 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 WDR77Q9BQA1 342 aaPredicted RBP9.69□□□□□ -0.86
TPM3-217ENST00000504663 YIPF4Q9BSR8 244 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 RAD21L1Q9H4I0 556 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 DCLRE1BQ9H816 532 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 ARMC1Q9NVT9 282 aa9.69□□□□□ -0.86
TPM3-217ENST00000504663 EXPH5Q8NEV8 1989 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.68□□□□□ -0.86
TPM3-217ENST00000504663 SPAARA0A1B0GVQ0 90 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 MEN1O00255 615 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 FOXD2O60548 495 aaPredicted RBP9.68□□□□□ -0.86
TPM3-217ENST00000504663 EPPINO95925 133 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 SERPINA1P01009 418 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 GPIP06744 558 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 CHRM4P08173 479 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 HBQ1P09105 142 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 ZGLP1P0C6A0 271 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 CD247P20963 164 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 CSRP1P21291 193 aaKnown RBP9.68□□□□□ -0.86
TPM3-217ENST00000504663 NT5EP21589 574 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 MATN1P21941 496 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 SSTR4P31391 388 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 MAGEA2P43356 314 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 GPR143P51810 404 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 DCDP81605 110 aaKnown RBP9.68□□□□□ -0.86
TPM3-217ENST00000504663 PRR5P85299 388 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 CDK6Q00534 326 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 NHLH1Q02575 133 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 SLC13A2Q13183 592 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 SYPL1Q16563 259 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 DUSP5Q16690 384 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 ZNF630Q2M218 657 aaPredicted RBP9.68□□□□□ -0.86
TPM3-217ENST00000504663 CCDC157Q569K6 752 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 CRB2Q5IJ48 1285 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 AP1ARQ63HQ0 302 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 ANGPTL8Q6UXH0 198 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 LANCL3Q6ZV70 420 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 RAB11FIP2Q7L804 512 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 OVCH1Q7RTY7 1134 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 TIPARPQ7Z3E1 657 aaKnown RBP9.68□□□□□ -0.86
TPM3-217ENST00000504663 VWA5B2Q8N398 1253 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 SLC16A11Q8NCK7 471 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 OR52R1Q8NGF1 315 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 PTCHD1Q96NR3 888 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 PKP2Q99959 881 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 LMF2Q9BU23 707 aaKnown RBP9.68□□□□□ -0.86
TPM3-217ENST00000504663 ACTRT3Q9BYD9 372 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 TRIM15Q9C019 465 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 C14orf105Q9NVL8 296 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 DDX18Q9NVP1 670 aaKnown RBP9.68□□□□□ -0.86
TPM3-217ENST00000504663 SLC39A1Q9NY26 324 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 FAF1Q9UNN5 650 aaPredicted RBP9.68□□□□□ -0.86
TPM3-217ENST00000504663 PCDHGA3Q9Y5H0 932 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 RIF1Q5UIP0 2472 aaKnown RBP9.68□□□□□ -0.86
TPM3-217ENST00000504663 CEP250Q9BV73 2442 aa9.68□□□□□ -0.86
TPM3-217ENST00000504663 FAM186AA6NE01 2351 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 CCDC187A0A096LP49 1063 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 CENPVL1A0A0U1RR11 272 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 CLDN4O14493 209 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 TERTO14746 1132 aaKnown RBP9.67□□□□□ -0.86
TPM3-217ENST00000504663 CASQ2O14958 399 aaPredicted RBP9.67□□□□□ -0.86
TPM3-217ENST00000504663 ICMTO60725 284 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 KLF7O75840 302 aaPredicted RBP9.67□□□□□ -0.86
TPM3-217ENST00000504663 PRKD3O94806 890 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 NKX2-2O95096 273 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 ALBP02768 609 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 BCHEP06276 602 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 GCKP35557 465 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 PRKAG1P54619 331 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 PSG6Q00889 435 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 PLAURQ03405 335 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 STX4Q12846 297 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 SERTAD2Q14140 314 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 FAM69BQ5VUD6 431 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 ZFP1Q6P2D0 407 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 FAM199XQ6PEV8 388 aaPredicted RBP9.67□□□□□ -0.86
TPM3-217ENST00000504663 TMEM205Q6UW68 189 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 SHISA6Q6ZSJ9 500 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 EIF3MQ7L2H7 374 aaKnown RBP9.67□□□□□ -0.86
TPM3-217ENST00000504663 MARCH9Q86YJ5 346 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 PRSS58Q8IYP2 241 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 CACTIN-AS1Q8N1I8 211 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 PQLC1Q8N2U9 271 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 NFAM1Q8NET5 270 aaPredicted RBP9.67□□□□□ -0.86
TPM3-217ENST00000504663 TNIP2Q8NFZ5 429 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 GPR32P1Q8NGA4 272 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 OR10Q1Q8NGQ4 319 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 ZNF721Q8TF20 911 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 CLIP3Q96DZ5 547 aa9.67□□□□□ -0.86
TPM3-217ENST00000504663 RSRC1Q96IZ7 334 aaKnown RBP9.67□□□□□ -0.86
TPM3-217ENST00000504663 DGAT2Q96PD7 388 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms