RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 PNMA8BQ9ULN7 279 aaPredicted RBP7□□□□□ -1.29
PDGFC-203ENST00000502773 RNF6Q9Y252 685 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 HELZP42694 1942 aaKnown RBP7□□□□□ -1.29
PDGFC-203ENST00000502773 MTCL1Q9Y4B5 1905 aaKnown RBP7□□□□□ -1.29
PDGFC-203ENST00000502773 SAP18O00422 153 aaKnown RBP7□□□□□ -1.29
PDGFC-203ENST00000502773 ADAM23O75077 832 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 RCBTB2O95199 551 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 OR5F1O95221 314 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 KLF8O95600 359 aaPredicted RBP7□□□□□ -1.29
PDGFC-203ENST00000502773 IFNGP01579 166 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 S100A6P06703 90 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 DBIP07108 87 aaKnown RBP7□□□□□ -1.29
PDGFC-203ENST00000502773 CYP4B1P13584 511 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 F3P13726 295 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 ZNF3P17036 446 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 PAICSP22234 425 aaKnown RBP7□□□□□ -1.29
PDGFC-203ENST00000502773 ATP5A1P25705 553 aaKnown RBP7□□□□□ -1.29
PDGFC-203ENST00000502773 PCBP4P57723 403 aaKnown RBP7□□□□□ -1.29
PDGFC-203ENST00000502773 RGS8P57771 180 aaPredicted RBP7□□□□□ -1.29
PDGFC-203ENST00000502773 ZIC1Q15915 447 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 TNFAIP8L2Q6P589 184 aaPredicted RBP7□□□□□ -1.29
PDGFC-203ENST00000502773 KLHL17Q6TDP4 642 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 ZNF730Q6ZMV8 503 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 RASSF6Q6ZTQ3 369 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 B3GNT8Q7Z7M8 397 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 SLC22A16Q86VW1 577 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 ZNF547Q8IVP9 402 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 ZNF440Q8IYI8 595 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 TMEM145Q8NBT3 493 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 HAVCR2Q8TDQ0 301 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 NUAK2Q9H093 628 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 CHST8Q9H2A9 424 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 ACOT13Q9NPJ3 140 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 PAK1IP1Q9NWT1 392 aaPredicted RBP7□□□□□ -1.29
PDGFC-203ENST00000502773 RPS6KB2Q9UBS0 482 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 USP22Q9UPT9 525 aa7□□□□□ -1.29
PDGFC-203ENST00000502773 A0A0A6YYD5 115 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 FAM172BPA6NC97 362 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 CLIC3O95833 236 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 TSPAN19P0C672 248 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 FMO3P31513 532 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 POU6F2P78424 691 aaPredicted RBP6.99□□□□□ -1.29
PDGFC-203ENST00000502773 LGALS3BPQ08380 585 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 TARDBPQ13148 414 aaKnown RBP eCLIP6.99□□□□□ -1.29
PDGFC-203ENST00000502773 ADPRMQ3LIE5 342 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 ZNF404Q494X3 552 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 CCSMST1Q4G0I0 132 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 ARMCX4Q5H9R4 360 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 SLC48A1Q6P1K1 146 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 SLC36A4Q6YBV0 504 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 GID4Q8IVV7 300 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 DNAJC22Q8N4W6 341 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 NUP43Q8NFH3 380 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 LGALS12Q96DT0 336 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 C17orf62Q9BQA9 187 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 CDCA4Q9BXL8 241 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 RASSF1Q9NS23 344 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 PAQR5Q9NXK6 330 aaPredicted RBP6.99□□□□□ -1.29
PDGFC-203ENST00000502773 AQP9O43315 295 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 TP53P04637 393 aaPredicted RBP6.99□□□□□ -1.29
PDGFC-203ENST00000502773 CHRM5P08912 532 aaPredicted RBP6.99□□□□□ -1.29
PDGFC-203ENST00000502773 CFL1P23528 166 aaKnown RBP6.99□□□□□ -1.29
PDGFC-203ENST00000502773 DGKEP52429 567 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 LBX1P52954 281 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 PRKAG1P54619 331 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 ZNF181Q2M3W8 571 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 PLAG1Q6DJT9 500 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 PYHIN1Q6K0P9 492 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 Q6ZNX1 250 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 KRT74Q7RTS7 529 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 GPR155Q7Z3F1 870 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 GKN2Q86XP6 184 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 SLC38A6Q8IZM9 456 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 CDRT4Q8N9R6 151 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 OR5H6Q8NGV6 325 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 ZNF675Q8TD23 568 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 SLC38A5Q8WUX1 472 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 TMIGD2Q96BF3 282 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 SHDQ96IW2 340 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 AMDHD1Q96NU7 426 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 IL17FQ96PD4 163 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 ZFYVE21Q9BQ24 234 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 ERVK-18Q9QC07 812 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 EBF1Q9UH73 591 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 STUB1Q9UNE7 303 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 KCNK6Q9Y257 313 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 SLC31A1O15431 190 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 PRAMEF4O60810 478 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 BCAS1O75363 584 aaPredicted RBP6.99□□□□□ -1.29
PDGFC-203ENST00000502773 MT-ND2P03891 347 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 GUSBP08236 651 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 PSKH1P11801 424 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 BTN3A2P78410 334 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 GAB1Q13480 694 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 SWI5Q1ZZU3 235 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 SLC25A30Q5SVS4 291 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 PRAMEF9Q5VWM5 478 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 SLX4IPQ5VYV7 408 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 FAM86B1Q8N7N1 296 aa6.99□□□□□ -1.29
PDGFC-203ENST00000502773 MYOCQ99972 504 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms