RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 CHRNB3Q05901 458 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 TGIF1Q15583 401 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 GUCA2BQ16661 112 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 KLHL22Q53GT1 634 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ARSIQ5FYB1 569 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 KRBOX4Q5JUW0 171 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 SPANXN3Q5MJ09 141 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 MANEAQ5SRI9 462 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ATXN7L2Q5T6C5 722 aaPredicted RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ZNF551Q7Z340 670 aaPredicted RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 PROSER1Q86XN7 944 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 BVESQ8NE79 360 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 KBTBD8Q8NFY9 601 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 OR6S1Q8NH40 331 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 TRMT10AQ8TBZ6 339 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ASZ1Q8WWH4 475 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 MYLIPQ8WY64 445 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ING5Q8WYH8 240 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 WBP2Q969T9 261 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 TUBGCP3Q96CW5 907 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 MARS2Q96GW9 593 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ZNF285Q96NJ3 590 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 TMEM245Q9H330 911 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ANKHQ9HCJ1 492 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 HHATLQ9HCP6 504 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 PRMT8Q9NR22 394 aaPredicted RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 DNAJC11Q9NVH1 559 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 RLIMQ9NVW2 624 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 CFAP97Q9P2B7 532 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 RPS6KA6Q9UK32 745 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 MRTO4Q9UKD2 239 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 FAM240BA0A1B0GVZ2 78 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 A0A1B0GWJ7 208 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 CLN5O75503 358 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 GADD45GO95257 159 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 EFNA1P20827 205 aaPredicted RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 SOX6P35712 828 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ASMTP46597 345 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 RPL34P49207 117 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 SCAPQ12770 1279 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 HNRNPA0Q13151 305 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 IKZF1Q13422 519 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 UNC50Q53HI1 259 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ZRANB3Q5FWF4 1079 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 RNASE12Q5GAN4 147 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 OR2B11Q5JQS5 317 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 LRRC73Q5JTD7 316 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 CPZQ66K79 652 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 MSANTD2Q6P1R3 559 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 USP45Q70EL2 814 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 VTCN1Q7Z7D3 282 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 SULF2Q8IWU5 870 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 GHDCQ8N2G8 530 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 TBC1D19Q8N5T2 526 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 LRRC17Q8N6Y2 441 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ZNF461Q8TAF7 563 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 SKA2Q8WVK7 121 aaPredicted RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 COL26A1Q96A83 441 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 MTERF3Q96E29 417 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 SFXN2Q96NB2 322 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 COL21A1Q96P44 957 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 TREX2Q9BQ50 279 aaPredicted RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 PTDSS2Q9BVG9 487 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 BTBD1Q9H0C5 482 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 QRSL1Q9H0R6 528 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 DMRT3Q9NQL9 472 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 PURGQ9UJV8 347 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 FCF1Q9Y324 198 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ASB1Q9Y576 335 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ARL5AQ9Y689 179 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 CDH10Q9Y6N8 788 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 KNL1Q8NG31 2342 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 CXorf65A6NEN9 183 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 NCF1BA6NI72 391 aaPredicted RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 NCF1CA8MVU1 366 aaPredicted RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 INMT-MINDY4F8WBC2 141 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 CD3EAPO15446 510 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 RRP8O43159 456 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 LYRM1O43325 122 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 TXNL1O43396 289 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 IPO13O94829 963 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 CDRT1O95170 752 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 HPRP00739 348 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 IGF2P01344 180 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 CRYBA1P05813 215 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 FGF2P09038 288 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 PRSS56P0CW18 603 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 NCF1P14598 390 aaPredicted RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 GGT1P19440 569 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 LHCGRP22888 699 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC6A4P31645 630 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 BTCP35070 178 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ACTR1BP42025 376 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 MAPKAPK2P49137 400 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 CLCN5P51795 746 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 RHOAP61586 193 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 TNFRSF17Q02223 184 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC3A1Q07837 685 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ST3GAL4Q11206 333 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 PCID2Q5JVF3 399 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms