RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 NXF5Q9H1B4 397 aaKnown RBP11.79□□□□□ -0.52
HSPG2-213ENST00000498495 DEFB127Q9H1M4 99 aa11.79□□□□□ -0.52
HSPG2-213ENST00000498495 ANKRA2Q9H9E1 313 aa11.79□□□□□ -0.52
HSPG2-213ENST00000498495 IL1RL2Q9HB29 575 aa11.79□□□□□ -0.52
HSPG2-213ENST00000498495 SH2D2AQ9NP31 389 aa11.79□□□□□ -0.52
HSPG2-213ENST00000498495 TAS2R9Q9NYW1 312 aa11.79□□□□□ -0.52
HSPG2-213ENST00000498495 GIMAP2Q9UG22 337 aa11.79□□□□□ -0.52
HSPG2-213ENST00000498495 EIF3LQ9Y262 564 aaKnown RBP11.79□□□□□ -0.52
HSPG2-213ENST00000498495 DTX4Q9Y2E6 619 aa11.79□□□□□ -0.52
HSPG2-213ENST00000498495 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.79□□□□□ -0.52
HSPG2-213ENST00000498495 BAHCC1Q9P281 2608 aa11.79□□□□□ -0.52
HSPG2-213ENST00000498495 SPENQ96T58 3664 aaKnown RBP11.79□□□□□ -0.52
HSPG2-213ENST00000498495 NBASA2RRP1 2371 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 A0A087WV62 115 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 PLOD2O00469 737 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 ACOX3O15254 700 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 PDPK1O15530 556 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 CDC40O60508 579 aaKnown RBP eCLIP11.78□□□□□ -0.52
HSPG2-213ENST00000498495 TBX19O60806 448 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 PRPS2P11908 318 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 ABCD3P28288 659 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 GPC1P35052 558 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 RPL3P39023 403 aaKnown RBP11.78□□□□□ -0.52
HSPG2-213ENST00000498495 MANFP55145 182 aaKnown RBP11.78□□□□□ -0.52
HSPG2-213ENST00000498495 FBXW4P57775 412 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 KCNJ2P63252 427 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 BST1Q10588 318 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 MAD2L1Q13257 205 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-213ENST00000498495 RPS6KA2Q15349 733 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 PDCD2Q16342 344 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-213ENST00000498495 NNATQ16517 81 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 TBCELQ5QJ74 424 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 PRAMEF20Q5VT98 475 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 C1QL3Q5VWW1 255 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 ATG16L1Q676U5 607 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 ANKRD26P1Q6NSI1 321 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 TMEM107Q6UX40 140 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 HDXQ7Z353 690 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 NUP54Q7Z3B4 507 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 FJX1Q86VR8 437 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 SPPL2CQ8IUH8 684 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 TRIM42Q8IWZ5 723 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 FBXW8Q8N3Y1 598 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 LIX1Q8N485 282 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 OR7G2Q8NG99 324 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 OR52N2Q8NGI0 321 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 MTERF3Q96E29 417 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 MAGED4Q96JG8 741 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 PPP1R36Q96LQ0 422 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 AMDHD1Q96NU7 426 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 SORT1Q99523 831 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 C1orf50Q9BV19 199 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 TTTY12Q9BZ98 90 aa11.78□□□□□ -0.52
HSPG2-213ENST00000498495 TUBA8Q9NY65 449 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-213ENST00000498495 GPR55Q9Y2T6 319 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-213ENST00000498495 CHCHD2Q9Y6H1 151 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-213ENST00000498495 HELZ2Q9BYK8 2649 aaKnown RBP11.77□□□□□ -0.52
HSPG2-213ENST00000498495 GCN1Q92616 2671 aaKnown RBP11.77□□□□□ -0.52
HSPG2-213ENST00000498495 A0A0G2JMM0 328 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 A0A1W2PPB8 328 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 A0A1W2PRS3 328 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 ANKRD33BA6NCL7 494 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 FRG2CA6NGY1 282 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 FAM166BA8MTA8 275 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 KIR3DP1A8MWS1 328 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 SLC19A2O60779 497 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 COQ9O75208 318 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 NME6O75414 186 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 ERN1O75460 977 aaKnown RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 REM1O75628 298 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 PPM1BO75688 479 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 PDE9AO76083 593 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 ABCB1P08183 1280 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 ABOP16442 354 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 MC3RP41968 323 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 PER3P56645 1201 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 HSF1Q00613 529 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 EMX2Q04743 252 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 PLCXD2Q0VAA5 305 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 SLC10A1Q14973 349 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 TMEM198Q66K66 360 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 ZNF551Q7Z340 670 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 GOLGA6L1Q8N7Z2 621 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 ZFP28Q8NHY6 868 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 SPPL2AQ8TCT8 520 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 RELTQ969Z4 430 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 CIDECQ96AQ7 238 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 ARL8AQ96BM9 186 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 OMA1Q96E52 524 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 ELP4Q96EB1 424 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 ZBED6CLQ96FA7 236 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 ZNF764Q96H86 408 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 JSRP1Q96MG2 331 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 SECISBP2Q96T21 854 aaKnown RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 PRPF18Q99633 342 aaKnown RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 DOHHQ9BU89 302 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 MANSC1Q9H8J5 431 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 FOLH1BQ9HBA9 442 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 DDX18Q9NVP1 670 aaKnown RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 PNPOQ9NVS9 261 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms