RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 HERVK_113P63132 956 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 ERVK-8P63133 956 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 CNTN2Q02246 1040 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 TMED1Q13445 227 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 ITPK1Q13572 414 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 EMC2Q15006 297 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 CAMK4Q16566 473 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 PDK4Q16654 411 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 ZSWIM7Q19AV6 140 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 ZFP69Q49AA0 526 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 CCDC152Q4G0S7 254 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 RABGAP1LQ5R372 815 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 DMKNQ6E0U4 476 aaPredicted RBP3.09□□□□□ -1.91
CALD1-224ENST00000498254 NIPAL3Q6P499 406 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 ARHGAP11AQ6P4F7 1023 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 FRRS1Q6ZNA5 592 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 GPR142Q7Z601 462 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 NUP37Q8NFH4 326 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 OR52J3Q8NH60 311 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 PCNPQ8WW12 178 aaKnown RBP3.09□□□□□ -1.91
CALD1-224ENST00000498254 C17orf50Q8WW18 174 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 GIMAP1Q8WWP7 306 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 ZNF606Q8WXB4 792 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 TMEM190Q8WZ59 177 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 LHX4Q969G2 390 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 PINX1Q96BK5 328 aaKnown RBP3.09□□□□□ -1.91
CALD1-224ENST00000498254 FBXO17Q96EF6 278 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 DHTKD1Q96HY7 919 aaPredicted RBP3.09□□□□□ -1.91
CALD1-224ENST00000498254 AGAP3Q96P47 875 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 RCHY1Q96PM5 261 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 TESK2Q96S53 571 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 ZNF607Q96SK3 696 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 ZSCAN5AQ9BUG6 496 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 WRAP53Q9BUR4 548 aaKnown RBP3.09□□□□□ -1.91
CALD1-224ENST00000498254 RAB11FIP5Q9BXF6 653 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 ERVK-6Q9BXR3 956 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 MRPL13Q9BYD1 178 aaKnown RBP3.09□□□□□ -1.91
CALD1-224ENST00000498254 PUS3Q9BZE2 481 aaKnown RBP3.09□□□□□ -1.91
CALD1-224ENST00000498254 GORASP2Q9H8Y8 452 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 MED20Q9H944 212 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 IL1RL2Q9HB29 575 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 FGF22Q9HCT0 170 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 TRPV5Q9NQA5 729 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 FAM114A2Q9NRY5 505 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 SMPD3Q9NY59 655 aaPredicted RBP3.09□□□□□ -1.91
CALD1-224ENST00000498254 GPR83Q9NYM4 423 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 TMEM181Q9P2C4 612 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 B9D1Q9UPM9 204 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 NIP7Q9Y221 180 aaKnown RBP eCLIP3.09□□□□□ -1.91
CALD1-224ENST00000498254 SF3B1O75533 1304 aaKnown RBP eCLIP3.09□□□□□ -1.91
CALD1-224ENST00000498254 FANCIQ9NVI1 1328 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 PARD3Q8TEW0 1356 aa3.09□□□□□ -1.92
CALD1-224ENST00000498254 A0A087X002 238 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 IQCMA0A1B0GVH7 501 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 CLRN2A0PK11 232 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 ZSCAN5CA6NGD5 496 aaPredicted RBP3.08□□□□□ -1.92
CALD1-224ENST00000498254 IGLON5A6NGN9 336 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 LRRC30A6NM36 301 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 WASH3PC4AMC7 463 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 SLCO1B7G3V0H7 640 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 CYB561D2O14569 222 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 EI24O14681 340 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 IMPA2O14732 288 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 CASKO14936 926 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 ZNF821O75541 412 aaPredicted RBP3.08□□□□□ -1.92
CALD1-224ENST00000498254 BBOX1O75936 387 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 NXPH4O95158 308 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 NDUFA7O95182 113 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 ZSCAN5DPP0CG00 497 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 UCP1P25874 307 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 CALML3P27482 149 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 AXLP30530 894 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 CA8P35219 290 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 BRCC3P46736 316 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 MAPK6Q16659 721 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 ANKRD55Q3KP44 614 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 ACSF3Q4G176 576 aaPredicted RBP3.08□□□□□ -1.92
CALD1-224ENST00000498254 ZNF311Q5JNZ3 666 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 CFAP157Q5JU67 520 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 PMF1Q6P1K2 205 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 LRRC8BQ6P9F7 803 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 CBLN3Q6UW01 205 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 CCBE1Q6UXH8 406 aaPredicted RBP3.08□□□□□ -1.92
CALD1-224ENST00000498254 ZNF562Q6V9R5 426 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 WASH2PQ6VEQ5 465 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 PAQR9Q6ZVX9 377 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 TMEM110Q86TL2 294 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 CBWD2Q8IUF1 395 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 CCDC36Q8IYA8 594 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 METTL4Q8N3J2 472 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 OR52M1Q8NGK5 317 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 OR10G7Q8NGN6 311 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 PNPT1Q8TCS8 783 aaKnown RBP3.08□□□□□ -1.92
CALD1-224ENST00000498254 SHC3Q92529 594 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 OSTF1Q92882 214 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 SLCO2A1Q92959 643 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 SLC25A36Q96CQ1 311 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 RBM24Q9BX46 236 aaKnown RBP3.08□□□□□ -1.92
CALD1-224ENST00000498254 TSPY26PQ9H489 355 aa3.08□□□□□ -1.92
CALD1-224ENST00000498254 DHX33Q9H6R0 707 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms