RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 PHACTR1Q9C0D0 580 aa14.89□□□□□ -0.03
VIM-208ENST00000497849 PLAC1Q9HBJ0 212 aa14.89□□□□□ -0.03
VIM-208ENST00000497849 GALNT9Q9HCQ5 603 aa14.89□□□□□ -0.03
VIM-208ENST00000497849 DNAJC11Q9NVH1 559 aa14.89□□□□□ -0.03
VIM-208ENST00000497849 MS4A12Q9NXJ0 267 aa14.89□□□□□ -0.03
VIM-208ENST00000497849 PSD3Q9NYI0 1048 aa14.89□□□□□ -0.03
VIM-208ENST00000497849 HEY2Q9UBP5 337 aa14.89□□□□□ -0.03
VIM-208ENST00000497849 CORO1CQ9ULV4 474 aaPredicted RBP14.89□□□□□ -0.03
VIM-208ENST00000497849 RNF112Q9ULX5 631 aa14.89□□□□□ -0.03
VIM-208ENST00000497849 DLGAP4Q9Y2H0 992 aa14.89□□□□□ -0.03
VIM-208ENST00000497849 SVEP1Q4LDE5 3571 aa14.89□□□□□ -0.03
VIM-208ENST00000497849 FRG2CA6NGY1 282 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 NCF1BA6NI72 391 aaPredicted RBP14.88□□□□□ -0.03
VIM-208ENST00000497849 A8MV72 311 aaPredicted RBP14.88□□□□□ -0.03
VIM-208ENST00000497849 NCF1CA8MVU1 366 aaPredicted RBP14.88□□□□□ -0.03
VIM-208ENST00000497849 CLGNO14967 610 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 OR10H2O60403 315 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 ICOSLGO75144 302 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 CDH16O75309 829 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 GPR75O95800 540 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 TGFB1P01137 390 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 NCF1P14598 390 aaPredicted RBP14.88□□□□□ -0.03
VIM-208ENST00000497849 EPORP19235 508 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 ABCD3P28288 659 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 ECHS1P30084 290 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 GALNSP34059 522 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 KBTBD12Q3ZCT8 623 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 TMEM35AQ53FP2 167 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 OR4C11Q6IEV9 310 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 TMEM81Q6P7N7 255 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 FRA10AC1Q70Z53 315 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 GPR180Q86V85 440 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 IFNEQ86WN2 208 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 GSPT2Q8IYD1 628 aaKnown RBP14.88□□□□□ -0.03
VIM-208ENST00000497849 NKAPQ8N5F7 415 aaKnown RBP14.88□□□□□ -0.03
VIM-208ENST00000497849 ZNF615Q8N8J6 731 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 ANKRD49Q8WVL7 239 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 HGDQ93099 445 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 CERS2Q96G23 380 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 NODALQ96S42 347 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 SLC39A3Q9BRY0 314 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 METTL7AQ9H8H3 244 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 ANKZF1Q9H8Y5 726 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 NFU1Q9UMS0 254 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 EXO1Q9UQ84 846 aaKnown RBP14.88□□□□□ -0.03
VIM-208ENST00000497849 LAMP3Q9UQV4 416 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 TEX264Q9Y6I9 313 aa14.88□□□□□ -0.03
VIM-208ENST00000497849 A0A1W2PS29 197 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 E7ESA3 106 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 HS3ST1O14792 307 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 CBR3O75828 277 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 TUBBP07437 444 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 CT62P0C5K7 136 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 GGT5P36269 586 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 GMPRP36959 345 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 CASP2P42575 452 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 KCNJ5P48544 419 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 NRG3P56975 720 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 RPS13P62277 151 aaKnown RBP14.87□□□□□ -0.03
VIM-208ENST00000497849 CAV1Q03135 178 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 TGFBIQ15582 683 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 ETFDHQ16134 617 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 BEX5Q5H9J7 111 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 SPANXN3Q5MJ09 141 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 HLA-DQA1Q5Y7H0 255 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 SLC30A6Q6NXT4 461 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 ADAMTSL2Q86TH1 951 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 IFT20Q8IY31 132 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 FBXO36Q8NEA4 188 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 CAVIN3Q969G5 261 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 ZBED6CLQ96FA7 236 aaPredicted RBP14.87□□□□□ -0.03
VIM-208ENST00000497849 TMEM204Q9BSN7 226 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 OSBPL11Q9BXB4 747 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 OR51B5Q9H339 312 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 ACTR8Q9H981 624 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 CXorf21Q9HAI6 301 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 CTNNAL1Q9UBT7 734 aa14.87□□□□□ -0.03
VIM-208ENST00000497849 GLOD5A6NK44 160 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 OVOL3O00110 214 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 PPM1BO75688 479 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 TTC4O95801 387 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 IDUAP35475 653 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 HSPA7P48741 367 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 RPS4XP62701 263 aaKnown RBP14.86□□□□□ -0.03
VIM-208ENST00000497849 SIRPAP78324 504 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 CHIT1Q13231 466 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 LAPTM5Q13571 262 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 E2F2Q14209 437 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 PAGE2BQ5JRK9 111 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 UBAP2Q5T6F2 1119 aaKnown RBP14.86□□□□□ -0.03
VIM-208ENST00000497849 KHDRBS2Q5VWX1 349 aaKnown RBP14.86□□□□□ -0.03
VIM-208ENST00000497849 OR2A2Q6IF42 318 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 DNM1P46Q6ZS02 220 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 P4HA3Q7Z4N8 544 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 ZBED8Q8IZ13 594 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 RNF175Q8N4F7 328 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 SNX31Q8N9S9 440 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 ZNF610Q8N9Z0 462 aa14.86□□□□□ -0.03
VIM-208ENST00000497849 ZNF845Q96IR2 970 aaPredicted RBP14.86□□□□□ -0.03
VIM-208ENST00000497849 C19orf24Q9BVV8 132 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms