RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 KDM8Q8N371 416 aa3.72□□□□□ -1.81
VPS36-206ENST00000497149 MRPL43Q8N983 215 aaKnown RBP3.72□□□□□ -1.81
VPS36-206ENST00000497149 SUMF1Q8NBK3 374 aa3.72□□□□□ -1.81
VPS36-206ENST00000497149 ZNF397Q8NF99 534 aaPredicted RBP3.72□□□□□ -1.81
VPS36-206ENST00000497149 FAM173AQ9BQD7 235 aa3.72□□□□□ -1.81
VPS36-206ENST00000497149 PNNQ9H307 717 aaKnown RBP3.72□□□□□ -1.81
VPS36-206ENST00000497149 ALG9Q9H6U8 611 aa3.72□□□□□ -1.81
VPS36-206ENST00000497149 CLEC5AQ9NY25 188 aa3.72□□□□□ -1.81
VPS36-206ENST00000497149 DHRS4-AS1Q9P1J3 65 aa3.72□□□□□ -1.81
VPS36-206ENST00000497149 ARMCX1Q9P291 453 aa3.72□□□□□ -1.81
VPS36-206ENST00000497149 CLIP2Q9UDT6 1046 aa3.72□□□□□ -1.81
VPS36-206ENST00000497149 A0A0J9YVX5 310 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 KRT87PA6NCN2 255 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 ADAM12O43184 909 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 LRRTM2O43300 516 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 BCL2L11O43521 198 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 TYROBPO43914 113 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 SSX5O60225 188 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 SRPX2O60687 465 aaPredicted RBP3.71□□□□□ -1.82
VPS36-206ENST00000497149 PDE5AO76074 875 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 SNRPCP09234 159 aaKnown RBP3.71□□□□□ -1.82
VPS36-206ENST00000497149 CYP11B1P15538 503 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 HSPA1LP34931 641 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 RPL34P49207 117 aaKnown RBP3.71□□□□□ -1.82
VPS36-206ENST00000497149 ATXN3P54252 364 aaPredicted RBP3.71□□□□□ -1.82
VPS36-206ENST00000497149 HAND2P61296 217 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 CRMP1Q14194 572 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 ACER2Q5QJU3 275 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 CNSTQ6PJW8 725 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 GOLGA7Q7Z5G4 137 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 P2RY8Q86VZ1 359 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 MARCH9Q86YJ5 346 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 SLC39A11Q8N1S5 342 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 HDDC3Q8N4P3 179 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 ZBP1Q9H171 429 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 IL20RAQ9UHF4 553 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 PLEKHA6Q9Y2H5 1048 aa3.71□□□□□ -1.82
VPS36-206ENST00000497149 KLF2Q9Y5W3 355 aaPredicted RBP3.71□□□□□ -1.82
VPS36-206ENST00000497149 TRIM49BA6NDI0 452 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 ERI2A8K979 691 aaKnown RBP3.7□□□□□ -1.82
VPS36-206ENST00000497149 CYSRT1A8MQ03 144 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 PDLIM1O00151 329 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 KBTBD11O94819 623 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 PIGRP01833 764 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 IL10P22301 178 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 RABIFP47224 123 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 ARHGDIAP52565 204 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 NAAAQ02083 359 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 SNX1Q13596 522 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 PDIA5Q14554 519 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 LTB4RQ15722 352 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 LRIT3Q3SXY7 679 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 ACSF3Q4G176 576 aaPredicted RBP3.7□□□□□ -1.82
VPS36-206ENST00000497149 PARP10Q53GL7 1025 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 ZNF774Q6NX45 483 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 ADAMTSL5Q6ZMM2 481 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 ZNF600Q6ZNG1 722 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 GPBP1Q86WP2 473 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 SLC22A18ASQ8N1D0 253 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 DQX1Q8TE96 717 aaKnown RBP3.7□□□□□ -1.82
VPS36-206ENST00000497149 TBCKQ8TEA7 893 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 AGAP11Q8TF27 550 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 CRYGNQ8WXF5 182 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 DLX4Q92988 240 aaPredicted RBP3.7□□□□□ -1.82
VPS36-206ENST00000497149 LHX4Q969G2 390 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 SAMD8Q96LT4 415 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 FAM111AQ96PZ2 611 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 APOOQ9BUR5 198 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 HSD3B7Q9H2F3 369 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 TSPY26PQ9H489 355 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 ESM1Q9NQ30 184 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 BCAP29Q9UHQ4 241 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 PURGQ9UJV8 347 aaKnown RBP3.7□□□□□ -1.82
VPS36-206ENST00000497149 PLA2G4CQ9UP65 541 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 PIN4Q9Y237 131 aaKnown RBP3.7□□□□□ -1.82
VPS36-206ENST00000497149 MMP24Q9Y5R2 645 aa3.7□□□□□ -1.82
VPS36-206ENST00000497149 IGHV3OR16-12A0A075B7B8 117 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 TRAV9-2A0A087WT02 112 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 ZNF354AO60765 605 aaPredicted RBP3.69□□□□□ -1.82
VPS36-206ENST00000497149 ZNF253O75346 499 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 TGFAP01135 160 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 IGHV3-9P01782 118 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 HOXB7P09629 217 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 HMGCLP35914 325 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 CSRP3P50461 194 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 HMGCS2P54868 508 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 SLC26A5P58743 744 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 IL1RL1Q01638 556 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 ZNF85Q03923 595 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 FUT7Q11130 342 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 BNIP1Q12981 228 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 SMC1AQ14683 1233 aaKnown RBP3.69□□□□□ -1.82
VPS36-206ENST00000497149 PARP6Q2NL67 630 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 TOR1AIP1Q5JTV8 583 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 SLC25A30Q5SVS4 291 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 SEL1L2Q5TEA6 688 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 CCBE1Q6UXH8 406 aaPredicted RBP3.69□□□□□ -1.82
VPS36-206ENST00000497149 RNF148Q8N7C7 305 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 OR4F17Q8NGA8 305 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 OR52J3Q8NH60 311 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms