RNA–Protein interactions for RNA: ENST00000497137.1

SPTSSB-202, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SPTSSB, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-202ENST00000497137 SIGLEC11Q96RL6 698 aa5.29□□□□□ -1.56
SPTSSB-202ENST00000497137 CSF3RQ99062 836 aa5.29□□□□□ -1.56
SPTSSB-202ENST00000497137 AGPAT1Q99943 283 aa5.29□□□□□ -1.56
SPTSSB-202ENST00000497137 C11orf70Q9BRQ4 267 aa5.29□□□□□ -1.56
SPTSSB-202ENST00000497137 KCNK13Q9HB14 408 aa5.29□□□□□ -1.56
SPTSSB-202ENST00000497137 SGK2Q9HBY8 427 aa5.29□□□□□ -1.56
SPTSSB-202ENST00000497137 RAVER2Q9HCJ3 691 aaKnown RBP5.29□□□□□ -1.56
SPTSSB-202ENST00000497137 FZD3Q9NPG1 666 aa5.29□□□□□ -1.56
SPTSSB-202ENST00000497137 RNF186Q9NXI6 227 aa5.29□□□□□ -1.56
SPTSSB-202ENST00000497137 SUN2Q9UH99 717 aa5.29□□□□□ -1.56
SPTSSB-202ENST00000497137 STUB1Q9UNE7 303 aa5.29□□□□□ -1.56
SPTSSB-202ENST00000497137 LOC105371242A0A075B767 164 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 TRAV26-1A0A087WT03 109 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 RNF222A6NCQ9 220 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 METTL21EPA6NDL7 271 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 ZNF814B7Z6K7 855 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 CLDN5O00501 218 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 ZNHIT1O43257 154 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 OR1F1O43749 312 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 FRAT2O75474 233 aaPredicted RBP5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 RBMXL2O75526 392 aaKnown RBP5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 RFPL2O75678 378 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 SERPINI2O75830 405 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 SOX30O94993 753 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 NDUFA7O95182 113 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 GOT2P00505 430 aaKnown RBP5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 PABPC4LP0CB38 370 aaKnown RBP5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 CD59P13987 128 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 AMD1P17707 334 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 GM2AP17900 193 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 LMO1P25800 156 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 NUP62P37198 522 aaPredicted RBP5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 NPY2RP49146 381 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 LIMK2P53671 638 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 PROK1P58294 105 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 EIF3EP60228 445 aaKnown RBP5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 ISL1P61371 349 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 TIMM10P62072 90 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 DNAJC3Q13217 504 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 MFAP5Q13361 173 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 HNRNPDQ14103 355 aaKnown RBP5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 ZNF234Q14588 700 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 PCK2Q16822 640 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 ZNF528Q3MIS6 628 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 LRIT3Q3SXY7 679 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 FSCBQ5H9T9 825 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 SPANXN2Q5MJ10 180 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 CAPN13Q6MZZ7 669 aaPredicted RBP5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 CDC42EP5Q6NZY7 148 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 CORO6Q6QEF8 472 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 RAD9BQ6WBX8 426 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 Q6ZTK2 550 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 CTU1Q7Z7A3 348 aaKnown RBP5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 SERINC5Q86VE9 423 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 ECHDC2Q86YB7 292 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 VSTM4Q8IW00 320 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 CCDC36Q8IYA8 594 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 RCOR2Q8IZ40 523 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 KLHDC1Q8N7A1 406 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 LMNTD1Q8N9Z9 388 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 KBTBD3Q8NAB2 608 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 SPATA4Q8NEY3 305 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 TCP11Q8WWU5 503 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 IGFBPL1Q8WX77 278 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 LPAR1Q92633 364 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 CASD1Q96PB1 797 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 CCNL2Q96S94 520 aaPredicted RBP5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 OMDQ99983 421 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 VIPAS39Q9H9C1 493 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 ELOVL3Q9HB03 270 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 NEK6Q9HC98 313 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 EXOC1Q9NV70 894 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 SLC38A7Q9NVC3 462 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 ONECUT1Q9UBC0 465 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 IL36AQ9UHA7 158 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 ZDHHC2Q9UIJ5 367 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 CDH9Q9ULB4 789 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 STK38LQ9Y2H1 464 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 LRP12Q9Y561 859 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 OR1A2Q9Y585 309 aa5.28□□□□□ -1.56
SPTSSB-202ENST00000497137 RAD50Q92878 1312 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 A0A1W2PN81 502 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 GLTPD2A6NH11 291 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 MANSC4A6NHS7 340 aaPredicted RBP5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 ZNF732B4DXR9 585 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 WDR1O75083 606 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 GAGE7O76087 117 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 CHRNA1P02708 482 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 ALPIP09923 528 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 GAGE12FP0CL80 117 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 GAGE12GP0CL81 117 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 GAGE12IP0CL82 117 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 TROVE2P10155 538 aaKnown RBP eCLIP5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 MYOD1P15172 320 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 C21orf33P30042 268 aaPredicted RBP5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 CHRNA7P36544 502 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 BNC1Q01954 994 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 GAGE1Q13065 139 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 GAGE4Q13068 117 aa5.27□□□□□ -1.57
SPTSSB-202ENST00000497137 ITGA9Q13797 1035 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms