RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 PCBP4P57723 403 aaKnown RBP7.86□□□□□ -1.15
USP54-215ENST00000497106 LPAL2Q16609 132 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 ZXDCQ2QGD7 858 aaPredicted RBP7.86□□□□□ -1.15
USP54-215ENST00000497106 THAP5Q7Z6K1 395 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 CARM1Q86X55 608 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 LGI4Q8N135 537 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 ZNF687Q8N1G0 1237 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 OR52P1PQ8NH57 321 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 LPAR4Q99677 370 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 ARRDC1-AS1Q9H2J1 176 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 DUSP22Q9NRW4 184 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 C5AR2Q9P296 337 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 FAM149AA5PLN7 773 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 EFCAB7A8K855 629 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 CYP7B1O75881 506 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 SP9P0CG40 484 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 CD1CP29017 333 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 AQP4P55087 323 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 ROR2Q01974 943 aaKnown RBP7.86□□□□□ -1.15
USP54-215ENST00000497106 FZD5Q13467 585 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 FLYWCH1Q4VC44 716 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 FRMPD2BQ6IN97 320 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 ZNF605Q86T29 641 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 HORMAD2Q8N7B1 307 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 ZNF354BQ96LW1 612 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 TRIM2Q9C040 744 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 PAPOLBQ9NRJ5 636 aaKnown RBP7.86□□□□□ -1.15
USP54-215ENST00000497106 STARD5Q9NSY2 213 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 RIMS3Q9UJD0 308 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 TESMINQ9Y4I5 508 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 PCDHGA8Q9Y5G5 932 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 OR6C76A6NM76 312 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 PGM3O95394 542 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 STT3AP46977 705 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 GFERP55789 205 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 MERTKQ12866 999 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 SLC14A1Q13336 389 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 EIF3IQ13347 325 aaKnown RBP7.86□□□□□ -1.15
USP54-215ENST00000497106 GAB1Q13480 694 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 NSDHLQ15738 373 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 SLC22A8Q8TCC7 542 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 HS6ST2Q96MM7 605 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 SLC46A1Q96NT5 459 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 SLX1AQ9BQ83 275 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 ZNF559Q9BR84 538 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 TMEM165Q9HC07 324 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 BCL2L10Q9HD36 194 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 UCKL1Q9NWZ5 548 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 HCN4Q9Y3Q4 1203 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 TRBV5-3A0A0A0MS03 114 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 C17orf105B2RV13 164 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 H3BN98 237 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 EI24O14681 340 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 BCKDKO14874 412 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 NME6O75414 186 aaPredicted RBP7.86□□□□□ -1.15
USP54-215ENST00000497106 OPN1SWP03999 348 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 ATP1B1P05026 303 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 ILKQ13418 452 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 EFR3AQ14156 821 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 IL11RAQ14626 422 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 GPR68Q15743 365 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 PRTGQ2VWP7 1150 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 DCAF12Q5T6F0 453 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 MLIPQ5VWP3 458 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 MFSD12Q6NUT3 480 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 ZNF793Q6ZN11 406 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 METTL27Q8N6F8 245 aaPredicted RBP7.86□□□□□ -1.15
USP54-215ENST00000497106 TRIM8Q9BZR9 551 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 THSD1Q9NS62 852 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 CLN6Q9NWW5 311 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 SLC39A1Q9NY26 324 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 HSPE1-MOB4S4R3N1 261 aa7.86□□□□□ -1.15
USP54-215ENST00000497106 TRIOBPQ9H2D6 2365 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 GP1BAP07359 652 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 ZNF24P17028 368 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 GTF2E2P29084 291 aaKnown RBP7.85□□□□□ -1.15
USP54-215ENST00000497106 EMP2P54851 167 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 DYNC1I2Q13409 638 aaKnown RBP7.85□□□□□ -1.15
USP54-215ENST00000497106 RUNX2Q13950 521 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 ELAVL1Q15717 326 aaKnown RBP7.85□□□□□ -1.15
USP54-215ENST00000497106 ENPP6Q6UWR7 440 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 OR4N5Q8IXE1 308 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 CMIPQ8IY22 773 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 OR6C1Q96RD1 312 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 OR8D2Q9GZM6 311 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 USE1Q9NZ43 259 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 DLGAP2Q9P1A6 1054 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 SATB2Q9UPW6 733 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 IGKV1-8A0A0C4DH67 115 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 PLOD3O60568 738 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 REM1O75628 298 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 DNAJB5O75953 348 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 CKMT1AP12532 417 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 BMP7P18075 431 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 CCR4P51679 360 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 GPR19Q15760 415 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 DCST2Q5T1A1 773 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 PIWIL3Q7Z3Z3 882 aaKnown RBP7.85□□□□□ -1.15
USP54-215ENST00000497106 BMP8AQ7Z5Y6 402 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 UBE3DQ7Z6J8 389 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms