RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 RAE1P78406 368 aaKnown RBP11.67□□□□□ -0.54
PTPRF-214ENST00000496043 HMGCS1Q01581 520 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 TLE4Q04727 773 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 DUSP2Q05923 314 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 TFF3Q07654 80 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 DUSP8Q13202 625 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 SF3B4Q15427 424 aaKnown RBP eCLIP11.67□□□□□ -0.54
PTPRF-214ENST00000496043 CCDC153Q494R4 210 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 SPDYAQ5MJ70 313 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 RIPPLY2Q5TAB7 128 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 FAM219BQ5XKK7 198 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 BICRALQ6AI39 1079 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 SLC30A6Q6NXT4 461 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 FAM180BQ6P0A1 224 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 SCIMPQ6UWF3 145 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 ZYG11AQ6WRX3 759 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 ULK2Q8IYT8 1036 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 CLYBLQ8N0X4 340 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 OR1J4Q8NGS1 313 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 UBLCP1Q8WVY7 318 aaPredicted RBP11.67□□□□□ -0.54
PTPRF-214ENST00000496043 ERP27Q96DN0 273 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 APIPQ96GX9 242 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 TMEM41AQ96HV5 264 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 TIMP4Q99727 224 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 ITPAQ9BY32 194 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 GSTO2Q9H4Y5 243 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 METTL7AQ9H8H3 244 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 PPCSQ9HAB8 311 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 SLC24A3Q9HC58 644 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 MCCC2Q9HCC0 563 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 MID1IP1Q9NPA3 183 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 GIMAP4Q9NUV9 329 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 SIRT5Q9NXA8 310 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 Q9UFV3 132 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 DTX4Q9Y2E6 619 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 PLLPQ9Y342 182 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 MYO9AB2RTY4 2548 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 NINQ8N4C6 2090 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 HSPB2A8KAH6 182 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 GNB5O14775 395 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 TO15178 435 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 ICOSLGO75144 302 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 EPPINO95925 133 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 HPNP05981 417 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 ANXA4P09525 319 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-214ENST00000496043 IGFBP2P18065 325 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 MSX1P28360 303 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 TIA1P31483 386 aaKnown RBP eCLIP11.66□□□□□ -0.54
PTPRF-214ENST00000496043 EMDP50402 254 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 HTR6P50406 440 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 NAGLUP54802 743 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 C2orf80Q0P641 193 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 PLCXD2Q0VAA5 305 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 SNTA1Q13424 505 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 TOMM20Q15388 145 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 LTB4RQ15722 352 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 HSPB2Q16082 182 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 CFAP157Q5JU67 520 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 FNDC7Q5VTL7 733 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 TIGD3Q6B0B8 471 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 TMEM81Q6P7N7 255 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 GALNT18Q6P9A2 607 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 SH2D5Q6ZV89 423 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 DMRTC2Q8IXT2 367 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-214ENST00000496043 PM20D2Q8IYS1 436 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 SIMC1Q8NDZ2 872 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 ZNF675Q8TD23 568 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 HGDQ93099 445 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 EXOSC8Q96B26 276 aaKnown RBP11.66□□□□□ -0.54
PTPRF-214ENST00000496043 NTNG2Q96CW9 530 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 TMCO6Q96DC7 493 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 OMA1Q96E52 524 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 KCNA7Q96RP8 456 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 SLC35C2Q9NQQ7 365 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 NPDC1Q9NQX5 325 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-214ENST00000496043 EMCNQ9ULC0 261 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 GPR55Q9Y2T6 319 aaPredicted RBP11.66□□□□□ -0.54
PTPRF-214ENST00000496043 C15orf41Q9Y2V0 281 aa11.66□□□□□ -0.54
PTPRF-214ENST00000496043 FRG2CA6NGY1 282 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 UBFD1O14562 309 aaKnown RBP11.65□□□□□ -0.54
PTPRF-214ENST00000496043 CRCPO75575 148 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 REM1O75628 298 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 CBR3O75828 277 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 PROCP04070 461 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 SHBGP04278 402 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 CPA3P15088 417 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 CRHR1P34998 444 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 ADH7P40394 386 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 DNAJB13P59910 316 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 MRPS35P82673 323 aaKnown RBP11.65□□□□□ -0.54
PTPRF-214ENST00000496043 NNATQ16517 81 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 IMPG1Q17R60 797 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 ERCC6LQ2NKX8 1250 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 SLC25A35Q3KQZ1 300 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 ZNF628Q5EBL2 1059 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 CES4AQ5XG92 561 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 VASNQ6EMK4 673 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 ANGPTL8Q6UXH0 198 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 TDRPQ86YL5 185 aa11.65□□□□□ -0.54
PTPRF-214ENST00000496043 LIX1LQ8IVB5 337 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms