RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 TMEM64Q6YI46 380 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 B3GNT6Q6ZMB0 384 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 CCDC116Q8IYX3 515 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 ADCY4Q8NFM4 1077 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 NEIL3Q8TAT5 605 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 TMEM41AQ96HV5 264 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 RILPQ96NA2 401 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 EXO5Q9H790 373 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 RRAGDQ9NQL2 400 aaPredicted RBP22.22■■□□□ 1.15
HLA-C-209ENST00000495835 SLC35C2Q9NQQ7 365 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 TAS2R7Q9NYW3 318 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 RNF6Q9Y252 685 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 DTX4Q9Y2E6 619 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 CREBBPQ92793 2442 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 RSL1D1O76021 490 aaKnown RBP22.21■■□□□ 1.15
HLA-C-209ENST00000495835 SLITRK5O94991 958 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 UROSP10746 265 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 ELAVL4P26378 380 aaKnown RBP22.21■■□□□ 1.15
HLA-C-209ENST00000495835 EMDP50402 254 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 FOXA1P55317 472 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 DUSP2Q05923 314 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 ZNF763Q0D2J5 394 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 PMPCAQ10713 525 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 EXOSC7Q15024 291 aaKnown RBP22.21■■□□□ 1.15
HLA-C-209ENST00000495835 IMPG1Q17R60 797 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 ZNF628Q5EBL2 1059 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 SPDYAQ5MJ70 313 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 CCDC63Q8NA47 563 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 OR52R1Q8NGF1 315 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 OR5M9Q8NGP3 310 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 EPS8L3Q8TE67 593 aaKnown RBP22.21■■□□□ 1.15
HLA-C-209ENST00000495835 TTYH2Q9BSA4 534 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 TRMOQ9BU70 441 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 ITPAQ9BY32 194 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 STMN4Q9H169 189 aaPredicted RBP22.21■■□□□ 1.15
HLA-C-209ENST00000495835 ANKZF1Q9H8Y5 726 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 PFDN4Q9NQP4 134 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 MKS1Q9NXB0 559 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 PLLPQ9Y342 182 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 NCKAP5O14513 1909 aa22.21■■□□□ 1.15
HLA-C-209ENST00000495835 FRG2CA6NGY1 282 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 FOXO6A8MYZ6 492 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 NPIPB8E9PQR5 432 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 PLOD3O60568 738 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 CRCPO75575 148 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 HPNP05981 417 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 NUDT17P0C025 328 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 DDCP20711 480 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 KIR3DL1P43629 444 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 NUP107P57740 925 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 DUSP8Q13202 625 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 SLC30A6Q6NXT4 461 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 ZNF585AQ6P3V2 769 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 RNF165Q6ZSG1 346 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 LIX1Q8N485 282 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.2■■□□□ 1.14
HLA-C-209ENST00000495835 JSRP1Q96MG2 331 aaPredicted RBP22.2■■□□□ 1.14
HLA-C-209ENST00000495835 TREX2Q9BQ50 279 aaPredicted RBP22.2■■□□□ 1.14
HLA-C-209ENST00000495835 UBQLN3Q9H347 655 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 GPR55Q9Y2T6 319 aaPredicted RBP22.2■■□□□ 1.14
HLA-C-209ENST00000495835 MYO9AB2RTY4 2548 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 ABCA12Q86UK0 2595 aa22.2■■□□□ 1.14
HLA-C-209ENST00000495835 SMIM23A6NLE4 172 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 C19orf84I3L1E1 186 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 ABCB7O75027 752 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 PCSK2P16519 638 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 ENDOUP21128 410 aaKnown RBP22.19■■□□□ 1.14
HLA-C-209ENST00000495835 PRPH2P23942 346 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 GDF1P27539 372 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 MASP1P48740 699 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 BTKQ06187 659 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 ERCC6LQ2NKX8 1250 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 FAM219BQ5XKK7 198 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 HGDQ93099 445 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 EXOSC8Q96B26 276 aaKnown RBP22.19■■□□□ 1.14
HLA-C-209ENST00000495835 OMA1Q96E52 524 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 BTBD9Q96Q07 612 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 MYNNQ9NPC7 610 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 KCNJ16Q9NPI9 418 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 FAM215AQ9Y5M1 114 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 FREM3P0C091 2139 aa22.19■■□□□ 1.14
HLA-C-209ENST00000495835 ENO4A6NNW6 628 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 MYO1GB0I1T2 1018 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 MRPS35P82673 323 aaKnown RBP22.18■■□□□ 1.14
HLA-C-209ENST00000495835 C2orf80Q0P641 193 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 PLCXD2Q0VAA5 305 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 SF3B4Q15427 424 aaKnown RBP eCLIP22.18■■□□□ 1.14
HLA-C-209ENST00000495835 LTB4RQ15722 352 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 C1orf185Q5T7R7 199 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 FNDC7Q5VTL7 733 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 RTL6Q6ICC9 239 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 FAM180BQ6P0A1 224 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 SCIMPQ6UWF3 145 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 IKBIPQ70UQ0 350 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 PRR22Q8IZ63 422 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 FAM9CQ8IZT9 166 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 RPRMLQ8N4K4 120 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 C14orf79Q96F83 325 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 BBS4Q96RK4 519 aa22.18■■□□□ 1.14
HLA-C-209ENST00000495835 TRIM8Q9BZR9 551 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms