RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 PCDHGB6Q9Y5F9 930 aa11.18□□□□□ -0.62
CSNK1E-213ENST00000495232 PCDHGA10Q9Y5H3 936 aa11.18□□□□□ -0.62
CSNK1E-213ENST00000495232 SNX8Q9Y5X2 465 aa11.18□□□□□ -0.62
CSNK1E-213ENST00000495232 COPG1Q9Y678 874 aaKnown RBP11.18□□□□□ -0.62
CSNK1E-213ENST00000495232 SPTA1P02549 2419 aa11.18□□□□□ -0.62
CSNK1E-213ENST00000495232 CNTRLQ7Z7A1 2325 aa11.18□□□□□ -0.62
CSNK1E-213ENST00000495232 E9PBE3 544 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 ACOX3O15254 700 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 ERN1O75460 977 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 SLC22A3O75751 556 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 NEURL1O76050 574 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 SORBS2O94875 1100 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 OR6B1O95007 311 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 RASAL1O95294 804 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 ABCB1P08183 1280 aaPredicted RBP11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 IFI6P09912 130 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 EFNA1P20827 205 aaPredicted RBP11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 S100A3P33764 101 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 KRT20P35900 424 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 PPICP45877 212 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 EMDP50402 254 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 PRKAG1P54619 331 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 MLLT10P55197 1068 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 UFM1P61960 85 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 PSPHP78330 225 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 INAQ16352 499 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 NNATQ16517 81 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 SPDYE7PQ495Y7 208 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 PDCD4Q53EL6 469 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 RPUSD3Q6P087 351 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 FAM180AQ6UWF9 173 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 RTL4Q6ZR62 310 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 CAMKMTQ7Z624 323 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 MIER2Q8N344 545 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 OR2L13Q8N349 312 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 CISD2Q8N5K1 135 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 Q8NA96 180 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 GLB1L3Q8NCI6 653 aaPredicted RBP11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 MDS2Q8NDY4 140 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 SIMC1Q8NDZ2 872 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 FAM13CQ8NE31 585 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 NUP43Q8NFH3 380 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 OR8J2Q8NGG1 315 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 CPT1CQ8TCG5 803 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 TESCQ96BS2 214 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 HSPBAP1Q96EW2 488 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 THOC1Q96FV9 657 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 MARK4Q96L34 752 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 SGCZQ96LD1 299 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 ITPAQ9BY32 194 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 EPN3Q9H201 632 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 FOLH1BQ9HBA9 442 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 AGPAT4Q9NRZ5 378 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 DCTN4Q9UJW0 460 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 TRIM33Q9UPN9 1127 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 KLF13Q9Y2Y9 288 aaPredicted RBP11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 OR10H1Q9Y4A9 318 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 GPR45Q9Y5Y3 372 aa11.17□□□□□ -0.62
CSNK1E-213ENST00000495232 SPENQ96T58 3664 aaKnown RBP11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 A0A0G2JND7 137 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 FRG2CA6NGY1 282 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 KLRC4-KLRK1H3BQV0 150 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 UPK1AO00322 258 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 RNASET2O00584 256 aaKnown RBP11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 TP53I11O14683 189 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 EMC8O43402 210 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 C6orf47O95873 294 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 P04436 131 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 DRD5P21918 477 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 CDK9P50750 372 aaKnown RBP11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 RPP38P78345 283 aaKnown RBP11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 TLE1Q04724 770 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 PLCXD2Q0VAA5 305 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 DUSP8Q13202 625 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 INPP5JQ15735 1006 aaPredicted RBP11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 FAM174BQ3ZCQ3 159 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 VPS26BQ4G0F5 336 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 FHL5Q5TD97 284 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 TMEM198Q66K66 360 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 OR4F3Q6IEY1 312 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 BHLHB9Q6PI77 547 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 GALNTL5Q7Z4T8 443 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 ZNF441Q8N8Z8 693 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 GOLM1Q8NBJ4 401 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 NUDT8Q8WV74 236 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 SPACA9Q96E40 222 aaPredicted RBP11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 SCMH1Q96GD3 660 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 EBF4Q9BQW3 602 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 NXF5Q9H1B4 397 aaKnown RBP11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 CLMPQ9H6B4 373 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 CCDC134Q9H6E4 229 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 EQTNQ9NQ60 294 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 ZCCHC3Q9NUD5 404 aaKnown RBP11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 ZIM2Q9NZV7 527 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 DTX4Q9Y2E6 619 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 NPFFR2Q9Y5X5 522 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 CFAP46Q8IYW2 2715 aa11.16□□□□□ -0.62
CSNK1E-213ENST00000495232 PRSS51A0A1B0GVH4 220 aa11.15□□□□□ -0.62
CSNK1E-213ENST00000495232 TTC36A6NLP5 189 aa11.15□□□□□ -0.62
CSNK1E-213ENST00000495232 ANKRD28O15084 1053 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms