RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 RBM44Q6ZP01 1051 aaKnown RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 VANGL1Q8TAA9 524 aaPredicted RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 DOK4Q8TEW6 326 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 ZG16BQ96DA0 208 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 TRNT1Q96Q11 434 aaKnown RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 PITX2Q99697 317 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 NIPSNAP1Q9BPW8 284 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 LRIT1Q9P2V4 623 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 C19orf53Q9UNZ5 99 aaPredicted RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 LIPT1Q9Y234 373 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 RHPN2P1A8MT19 583 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 CTSKP43235 329 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 FNTBP49356 437 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 PRICKLE4Q2TBC4 344 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 ZNF770Q6IQ21 691 aaPredicted RBP15.47■□□□□ 0.07
ATG4B-225ENST00000494465 MAFAQ8NHW3 353 aaPredicted RBP15.47■□□□□ 0.07
ATG4B-225ENST00000494465 NCSTNQ92542 709 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 CHRNA10Q9GZZ6 450 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 NMNAT1Q9HAN9 279 aaPredicted RBP15.47■□□□□ 0.07
ATG4B-225ENST00000494465 M0R3H8 397 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 LGI1O95970 557 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 ANXA8P13928 327 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 ALDH4A1P30038 563 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 RPS6KA3P51812 740 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 CDK5R2Q13319 367 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 FAM214AQ32MH5 1076 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 COLEC12Q5KU26 742 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 BORAQ6PGQ7 559 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 SLC35F3Q8IY50 421 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 ADAMTS15Q8TE58 950 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 PHF10Q8WUB8 498 aaKnown RBP15.47■□□□□ 0.07
ATG4B-225ENST00000494465 SGCDQ92629 289 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 ALPK1Q96QP1 1244 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 SPATA5L1Q9BVQ7 753 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 MAT2BQ9NZL9 334 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 CSNK1G3Q9Y6M4 447 aa15.47■□□□□ 0.07
ATG4B-225ENST00000494465 SPEGQ15772 3267 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 A0A087WV62 115 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 CCDC163A0A0D9SF12 145 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 TRBV4-1A0A0J9YWV2 114 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 ARRDC5A6NEK1 342 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 PLOD3O60568 738 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 CT62P0C5K7 136 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 ACP2P11117 423 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 CBLP22681 906 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 PI4KAP42356 2102 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 MLLT3P42568 568 aaPredicted RBP15.46■□□□□ 0.07
ATG4B-225ENST00000494465 PDX1P52945 283 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 OR1D5P58170 312 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 CFHR1Q03591 330 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 DUSP5Q16690 384 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 LAIR1Q6GTX8 287 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 TSPYL5Q86VY4 417 aaPredicted RBP15.46■□□□□ 0.07
ATG4B-225ENST00000494465 CNIH3Q8TBE1 160 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 ZNF675Q8TD23 568 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 CDS1Q92903 461 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 CTHRC1Q96CG8 243 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 DGCR14Q96DF8 476 aaKnown RBP15.46■□□□□ 0.07
ATG4B-225ENST00000494465 MYCBPQ99417 103 aaPredicted RBP15.46■□□□□ 0.07
ATG4B-225ENST00000494465 FUZQ9BT04 418 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 PAPOLBQ9NRJ5 636 aaKnown RBP15.46■□□□□ 0.07
ATG4B-225ENST00000494465 A4GNTQ9UNA3 340 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 PLCL2Q9UPR0 1127 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 CLCA2Q9UQC9 943 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 HCN4Q9Y3Q4 1203 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 CHST2Q9Y4C5 530 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 GMPPBQ9Y5P6 360 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 HSPE1-MOB4S4R3N1 261 aa15.46■□□□□ 0.07
ATG4B-225ENST00000494465 IGHV1OR21-1A0A087WYE8 117 aa15.46■□□□□ 0.06
ATG4B-225ENST00000494465 DUXAA6NLW8 204 aa15.46■□□□□ 0.06
ATG4B-225ENST00000494465 NUDT21O43809 227 aaKnown RBP15.46■□□□□ 0.06
ATG4B-225ENST00000494465 FCMRO60667 390 aa15.46■□□□□ 0.06
ATG4B-225ENST00000494465 TDGF1P13385 188 aa15.46■□□□□ 0.06
ATG4B-225ENST00000494465 RPP38P78345 283 aaKnown RBP15.46■□□□□ 0.06
ATG4B-225ENST00000494465 IL5RAQ01344 420 aa15.46■□□□□ 0.06
ATG4B-225ENST00000494465 SRSF5Q13243 272 aaKnown RBP15.46■□□□□ 0.06
ATG4B-225ENST00000494465 FAM53BQ14153 422 aa15.46■□□□□ 0.06
ATG4B-225ENST00000494465 DEF8Q6ZN54 512 aa15.46■□□□□ 0.06
ATG4B-225ENST00000494465 SETD9Q8NE22 299 aa15.46■□□□□ 0.06
ATG4B-225ENST00000494465 HRASLS5Q96KN8 279 aa15.46■□□□□ 0.06
ATG4B-225ENST00000494465 PINK1Q9BXM7 581 aa15.46■□□□□ 0.06
ATG4B-225ENST00000494465 ADNPQ9H2P0 1102 aa15.46■□□□□ 0.06
ATG4B-225ENST00000494465 HCN3Q9P1Z3 774 aa15.46■□□□□ 0.06
ATG4B-225ENST00000494465 TGFBR3LH3BV60 316 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 CASC3O15234 703 aaKnown RBP15.45■□□□□ 0.06
ATG4B-225ENST00000494465 CCNB2O95067 398 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 IFI6P09912 130 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 NT5EP21589 574 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 SEC23BQ15437 767 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 ATAD3BQ5T9A4 648 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 ZNF773Q6PK81 442 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 FRRS1Q6ZNA5 592 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 Q6ZPB1 254 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-225ENST00000494465 DGAT2L6Q6ZPD8 337 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 C16orf62Q7Z3J2 963 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 OR6T1Q8NGN1 323 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 SLC9A6Q92581 669 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 ZDHHC12Q96GR4 267 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 CD180Q99467 661 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 RBCK1Q9BYM8 510 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms