RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 DCAF7P61962 342 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 ZNF791Q3KP31 576 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-208ENST00000494334 TMEM198Q66K66 360 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 TMEM64Q6YI46 380 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 NATD1Q8N6N6 113 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 TMEM178AQ8NBL3 297 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 TMEM125Q96AQ2 219 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 LCORQ96JN0 433 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-208ENST00000494334 TEX37Q96LM6 180 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 VSTM2LQ96N03 204 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 TAAR6Q96RI8 345 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 EBF4Q9BQW3 602 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 TRIM4Q9C037 500 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 FOLH1BQ9HBA9 442 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 RYDENQ9NUL5 291 aaKnown RBP12.5□□□□□ -0.41
COL1A1-208ENST00000494334 DDX18Q9NVP1 670 aaKnown RBP12.5□□□□□ -0.41
COL1A1-208ENST00000494334 ASF1BQ9NVP2 202 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 TAS2R9Q9NYW1 312 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 GPR55Q9Y2T6 319 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-208ENST00000494334 NPFFR2Q9Y5X5 522 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 DYNC1I1O14576 645 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 UBDO15205 165 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 NME2P1O60361 137 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 COQ9O75208 318 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 FBXO45P0C2W1 286 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 CT45A8P0DMV1 189 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 CT45A9P0DMV2 189 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 PLA2G2AP14555 144 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 DRD5P21918 477 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 NME2P22392 152 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 IL12AP29459 219 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 WNT3P56703 355 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 NRG3P56975 720 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 PHC1P78364 1004 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 GUCY1A3Q02108 690 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 SRSF11Q05519 484 aaKnown RBP12.49□□□□□ -0.41
COL1A1-208ENST00000494334 IGFBP7Q16270 282 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 INAQ16352 499 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 NNATQ16517 81 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 PGS1Q32NB8 556 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 CT45A2Q5DJT8 189 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 OR4F3Q6IEY1 312 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 RTL4Q6ZR62 310 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 ACAD11Q709F0 780 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 GOLM1Q8NBJ4 401 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 PSD4Q8NDX1 1056 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 OR8J2Q8NGG1 315 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 GRHL3Q8TE85 626 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 OR5P2Q8WZ92 322 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 MIB2Q96AX9 1013 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 TESCQ96BS2 214 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 SPACA9Q96E40 222 aaPredicted RBP12.49□□□□□ -0.41
COL1A1-208ENST00000494334 HSPBAP1Q96EW2 488 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 MARK4Q96L34 752 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 SGCZQ96LD1 299 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 BARD1Q99728 777 aaKnown RBP12.49□□□□□ -0.41
COL1A1-208ENST00000494334 CLMPQ9H6B4 373 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 SH2D2AQ9NP31 389 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 TIMMDC1Q9NPL8 285 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 SIRT3Q9NTG7 399 aaPredicted RBP12.49□□□□□ -0.41
COL1A1-208ENST00000494334 MAP10Q9P2G4 905 aa12.49□□□□□ -0.41
COL1A1-208ENST00000494334 KALRNO60229 2985 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 ASPDHA6ND91 283 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 FRG2CA6NGY1 282 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 TO15178 435 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 ACOX3O15254 700 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 POLR3GO15318 223 aaPredicted RBP12.48□□□□□ -0.41
COL1A1-208ENST00000494334 SCN2BO60939 215 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 ERN1O75460 977 aaKnown RBP12.48□□□□□ -0.41
COL1A1-208ENST00000494334 C6orf47O95873 294 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 IDO1P14902 403 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 ABCD3P28288 659 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 KIR3DL1P43629 444 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 CLNS1AP54105 237 aaKnown RBP12.48□□□□□ -0.41
COL1A1-208ENST00000494334 CORO7P57737 925 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 PSG6Q00889 435 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 PMP22Q01453 160 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 RPS6KA2Q15349 733 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 NTRK2Q16620 822 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 GSTA3Q16772 222 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 PDCD4Q53EL6 469 aaKnown RBP12.48□□□□□ -0.41
COL1A1-208ENST00000494334 SPANXN4Q5MJ08 99 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 NPSR1Q6W5P4 371 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.48□□□□□ -0.41
COL1A1-208ENST00000494334 SULF2Q8IWU5 870 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 DND1Q8IYX4 353 aaKnown RBP12.48□□□□□ -0.41
COL1A1-208ENST00000494334 PRR22Q8IZ63 422 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 NUP43Q8NFH3 380 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 PSMA8Q8TAA3 256 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 PAQR8Q8TEZ7 354 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 FAR1Q8WVX9 515 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 GIMAP5Q96F15 307 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 THOC1Q96FV9 657 aaKnown RBP12.48□□□□□ -0.41
COL1A1-208ENST00000494334 BTBD9Q96Q07 612 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 CCDC28BQ9BUN5 200 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 TCF7L2Q9NQB0 619 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 DEPPQ9NTK1 212 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 NTMQ9P121 344 aa12.48□□□□□ -0.41
COL1A1-208ENST00000494334 KLF13Q9Y2Y9 288 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms