RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 PIGFQ07326 219 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 DMWDQ09019 674 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 GNA13Q14344 377 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 SEC23BQ15437 767 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 DEFB133Q30KQ1 61 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 FAM214AQ32MH5 1076 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 GPAT3Q53EU6 434 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 FGD3Q5JSP0 725 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 DHRS4L2Q6PKH6 230 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 SLC36A4Q6YBV0 504 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 B3GNT6Q6ZMB0 384 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 FRRS1Q6ZNA5 592 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 WDR53Q7Z5U6 358 aaPredicted RBP9.98□□□□□ -0.81
CLCN6-208ENST00000494028 OR4N5Q8IXE1 308 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 ENTHD1Q8IYW4 607 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 SPARTQ8N0X7 666 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 GALNT15Q8N3T1 639 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 DNAJC22Q8N4W6 341 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 CAMKK1Q8N5S9 505 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 SIMC1Q8NDZ2 872 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 OR13F1Q8NGS4 319 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 ZNF675Q8TD23 568 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 MUL1Q969V5 352 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 ISOC1Q96CN7 298 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 PRRC1Q96M27 445 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 ZNF285Q96NJ3 590 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 SIGLEC11Q96RL6 698 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 NELL2Q99435 816 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 MAP3K3Q99759 626 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 RHNO1Q9BSD3 238 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 PINK1Q9BXM7 581 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 RBCK1Q9BYM8 510 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 QRSL1Q9H0R6 528 aaKnown RBP9.98□□□□□ -0.81
CLCN6-208ENST00000494028 FANCEQ9HB96 536 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 STARD5Q9NSY2 213 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 MAN2C1Q9NTJ4 1040 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 MAT2BQ9NZL9 334 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 AASSQ9UDR5 926 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 A4GNTQ9UNA3 340 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 RNF6Q9Y252 685 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 HCN4Q9Y3Q4 1203 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 SPACA6W5XKT8 324 aa9.98□□□□□ -0.81
CLCN6-208ENST00000494028 ABCA7Q8IZY2 2146 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 TLCD2A6NGC4 264 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 LMO7DNF2Z398 122 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 SGK494L7N484 410 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 ZNF701M0R085 212 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 PCDHGA12O60330 932 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 SDC3O75056 442 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 LDB3O75112 727 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 WBP4O75554 376 aaKnown RBP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 UGT2B17O75795 530 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 SLITRK5O94991 958 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 OXSR1O95747 527 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 LGI1O95970 557 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 PORP16435 677 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 ITIH1P19827 911 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 EEF1B2P24534 225 aaKnown RBP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 DCKP27707 260 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 PCSK6P29122 969 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 TLX1P31314 330 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 TTKP33981 857 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 MLLT3P42568 568 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 MASP1P48740 699 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 CXCR4P61073 352 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 HNRNPKP61978 463 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 SLC35A2P78381 396 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 HPCAP84074 193 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 TEKQ02763 1124 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 CHRNEQ04844 493 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 LSAMPQ13449 338 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 DUSP5Q16690 384 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 C14orf28Q4W4Y0 310 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 C6orf132Q5T0Z8 1188 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 GTF2IRD2BQ6EKJ0 949 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 PGBD2Q6P3X8 592 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 KLHL35Q6PF15 583 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 KLHL17Q6TDP4 642 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 FAM92BQ6ZTR7 304 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 C16orf62Q7Z3J2 963 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 GTF2IRD2Q86UP8 949 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 CLVS1Q8IUQ0 354 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 MCATQ8IVS2 390 aaKnown RBP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 ALDH16A1Q8IZ83 802 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 BPIFB6Q8NFQ5 453 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 OR6T1Q8NGN1 323 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 OR9A4Q8NGU2 314 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 FAM81AQ8TBF8 368 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 ZFAND2BQ8WV99 257 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 CDS1Q92903 461 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 GTPBP3Q969Y2 492 aaKnown RBP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 TRNT1Q96Q11 434 aaKnown RBP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 ALPK1Q96QP1 1244 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 TUBA1CQ9BQE3 449 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 SPATA5L1Q9BVQ7 753 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 ANKHQ9HCJ1 492 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 VCX3AQ9NNX9 186 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 DNAAF2Q9NVR5 837 aaKnown RBP9.97□□□□□ -0.81
CLCN6-208ENST00000494028 UCKL1Q9NWZ5 548 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms