RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ATG4BQ9Y4P1 393 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 PCDHGA2Q9Y5H1 932 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 TRBV23OR9-2A0A075B6M9 112 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 A0A1W2PR48 441 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 FAM227AF5H4B4 570 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 M0R082 166 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 RASGRP1O95267 797 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 IFNW1P05000 195 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 ANXA8P13928 327 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 NTSP30990 170 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 NCBP2P52298 156 aaKnown RBP eCLIP12.99□□□□□ -0.33
VCP-207ENST00000493886 TPTEP56180 551 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 EOGTQ5NDL2 527 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 SZRD1Q7Z422 152 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 HRASLS5Q96KN8 279 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 BBS4Q96RK4 519 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 OR51E2Q9H255 320 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 MARCH7Q9H992 704 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 CCNB1IP1Q9NPC3 277 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 FBXO8Q9NRD0 319 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 ACER3Q9NUN7 267 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 APOBEC3BQ9UH17 382 aaKnown RBP12.99□□□□□ -0.33
VCP-207ENST00000493886 FBXW2Q9UKT8 454 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 PCOLCE2Q9UKZ9 415 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 TCRBV21S2A2A0A5A6 115 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 BTN3A3O00478 584 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 NAGAP17050 411 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 CD72P21854 359 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 CERS1P27544 350 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 ARFIP1P53367 373 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 ZNF605Q86T29 641 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 CLIP4Q8N3C7 705 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 SRFBP1Q8NEF9 429 aaKnown RBP12.99□□□□□ -0.33
VCP-207ENST00000493886 FAM83FQ8NEG4 500 aaPredicted RBP12.99□□□□□ -0.33
VCP-207ENST00000493886 SLC35G5Q96KT7 338 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 CHCHD6Q9BRQ6 235 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 SRMSQ9H3Y6 488 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 GIN1Q9NXP7 522 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 POU2F3Q9UKI9 436 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 TNFRSF10CO14798 259 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 PGRMC2O15173 223 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 ERAL1O75616 437 aaKnown RBP12.98□□□□□ -0.33
VCP-207ENST00000493886 MFN2O95140 757 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 RHCEP18577 417 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 HSD17B7P56937 341 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 RAB8AP61006 207 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 PUM1Q14671 1186 aaKnown RBP eCLIP12.98□□□□□ -0.336e-6■■■■□ 21
VCP-207ENST00000493886 PAQR7Q86WK9 346 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 Q8N9G6 341 aaPredicted RBP12.98□□□□□ -0.33
VCP-207ENST00000493886 PHF10Q8WUB8 498 aaKnown RBP12.98□□□□□ -0.33
VCP-207ENST00000493886 APOBEC4Q8WW27 367 aaKnown RBP12.98□□□□□ -0.33
VCP-207ENST00000493886 SLC38A4Q969I6 547 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 Q96MT0 163 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 ZCCHC3Q9NUD5 404 aaKnown RBP12.98□□□□□ -0.33
VCP-207ENST00000493886 ZSCAN32Q9NX65 697 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 PDE9AO76083 593 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 GADD45GO95257 159 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 AIFM1O95831 613 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 DLGAP3O95886 979 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 PTHP01270 115 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 OR12D1P0DN82 309 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 GABRG2P18507 467 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 CFL1P23528 166 aaKnown RBP12.98□□□□□ -0.33
VCP-207ENST00000493886 IL32P24001 234 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 LIMS1P48059 325 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 HMGA2P52926 109 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 SRP54P61011 504 aaKnown RBP12.98□□□□□ -0.33
VCP-207ENST00000493886 RPS3AP61247 264 aaKnown RBP12.98□□□□□ -0.33
VCP-207ENST00000493886 STXBP1P61764 594 aaKnown RBP12.98□□□□□ -0.33
VCP-207ENST00000493886 POC5Q8NA72 575 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 GPR32P1Q8NGA4 272 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 LILRB4Q8NHJ6 448 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 SLC22A8Q8TCC7 542 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 DACT3Q96B18 629 aaPredicted RBP12.98□□□□□ -0.33
VCP-207ENST00000493886 OR51I1Q9H343 314 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 OSGIN1Q9UJX0 560 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 POFUT2Q9Y2G5 429 aa12.98□□□□□ -0.33
VCP-207ENST00000493886 C2CD4DB7Z1M9 353 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 AGRPO00253 132 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 PCDH17O14917 1159 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 SLC28A2O43868 658 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 ASGR2P07307 311 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 POU1F1P28069 291 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 AKT2P31751 481 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 NKX2-5P52952 324 aaPredicted RBP12.97□□□□□ -0.33
VCP-207ENST00000493886 ZNF404Q494X3 552 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 C18orf63Q68DL7 685 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 SLC44A3Q8N4M1 653 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 GGHQ92820 318 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 AIFM2Q9BRQ8 373 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 RSPO3Q9BXY4 272 aaPredicted RBP12.97□□□□□ -0.33
VCP-207ENST00000493886 ZNF576Q9H609 170 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 KCNK12Q9HB15 430 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 P2RX2Q9UBL9 471 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 KLHL3Q9UH77 587 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 A6NCN8 305 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 A8MVJ9 347 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 F3P13726 295 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 PTGER1P34995 402 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 CTSKP43235 329 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms