RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CNTNAP3Q9BZ76 1288 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 ACTR10Q9NZ32 417 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 NLKQ9UBE8 527 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 ABCC3O15438 1527 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 CEBPZOSA8MTT3 80 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 C17orf112F2Z3M2 114 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 FAM227AF5H4B4 570 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 NPC1O15118 1278 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 TSPAN6O43657 245 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 ZIC2O95409 532 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 TNFSF4P23510 183 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 GCH1P30793 250 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 CRYZQ08257 329 aaKnown RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 FGFBP1Q14512 234 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 GRIN2CQ14957 1233 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 DUSP28Q4G0W2 176 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 MEX3BQ6ZN04 569 aaKnown RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 ACBD7Q8N6N7 88 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 OR51A7Q8NH64 312 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 FNDC8Q8TC99 324 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 PXYLP1Q8TE99 480 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 PAQR8Q8TEZ7 354 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 KCNIP2Q9NS61 270 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 NKX1-2Q9UD57 310 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 TESQ9UGI8 421 aaKnown RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 RPH3ALQ9UNE2 315 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 PCDHGA7Q9Y5G6 932 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 J3QR89 54 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 ARVCFO00192 962 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 TOR1AO14656 332 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 LYRM1O43325 122 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 GBAP04062 536 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 EIF4EP06730 217 aaKnown RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 UBBP0CG47 229 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 UBCP0CG48 685 aaKnown RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 AKAIN1P0CW23 69 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 HRH2P25021 359 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 RPS27AP62979 156 aaKnown RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 UBA52P62987 128 aaKnown RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 NKPD1Q17RQ9 610 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 OR52W1Q6IF63 320 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 SHFQ7M4L6 423 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 NLRP8Q86W28 1048 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 OR4N5Q8IXE1 308 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 OR2T35Q8NGX2 323 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF461Q8TAF7 563 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 DAZLQ92904 295 aaKnown RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 LGALS12Q96DT0 336 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 CHFRQ96EP1 664 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 MUS81Q96NY9 551 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 GPR20Q99678 358 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 SEMA6CQ9H3T2 930 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 LUZP4Q9P127 313 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 ATXN7L1Q9ULK2 861 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 KCNK6Q9Y257 313 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 IQSEC2Q5JU85 1478 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 LDB2O43679 373 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 DLX3O60479 287 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 GLSO94925 669 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 ADH1BP00325 375 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 SPATA31C1P0DKV0 1188 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 GDI1P31150 447 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 APLNRP35414 380 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 UBE2G2P60604 165 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 OGDHQ02218 1023 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 UGT3A2Q3SY77 523 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 TIGD5Q53EQ6 642 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 FAM69AQ5T7M9 428 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 LEG1Q6P5S2 330 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 INTS5Q6P9B9 1019 aaKnown RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 ASPGQ86U10 573 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 REM2Q8IYK8 340 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 METTL27Q8N6F8 245 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 OR5L2Q8NGL0 311 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 OR2A12Q8NGT7 310 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 OR1E3Q8WZA6 343 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 PTCHD1Q96NR3 888 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 LMF1Q96S06 567 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 FBXL12Q9NXK8 326 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 IRS2Q9Y4H2 1338 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 LOC102723532A0A0G2JNH3 316 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 A8MVM7 634 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 SEC14L6B5MCN3 397 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 RDH16O75452 317 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 OR4D2P58180 307 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 C6orf141Q5SZD1 244 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 HES5Q5TA89 166 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 MAMDC2Q7Z304 686 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 UEVLDQ8IX04 471 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 C1orf127Q8N9H9 656 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 LRRC57Q8N9N7 239 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 OR52P1PQ8NH57 321 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 TRMT2BQ96GJ1 504 aaKnown RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 PURBQ96QR8 312 aaKnown RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 HSD17B14Q9BPX1 270 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 SLC19A3Q9BZV2 496 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 MFFQ9GZY8 342 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 PATZ1Q9HBE1 687 aaKnown RBP7.51□□□□□ -1.21
BRCA1-221ENST00000493795 PLEKHJ1Q9NW61 149 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 SIX4Q9UIU6 781 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms