RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 KLF10Q13118 480 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 RUNX2Q13950 521 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 NKG7Q16617 165 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 SYT16Q17RD7 645 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 PGS1Q32NB8 556 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 MFSD4BQ5TF39 518 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 AGAP7PQ5VUJ5 663 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 FAM71E1Q6IPT2 247 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 Q6ZS92 163 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 TRPM8Q7Z2W7 1104 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 KRTCAP2Q8N6L1 136 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 GLB1L3Q8NCI6 653 aaPredicted RBP11.34□□□□□ -0.59
UPF3A-210ENST00000493727 OR9I1Q8NGQ6 314 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 OR51Q1Q8NH59 317 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.34□□□□□ -0.59
UPF3A-210ENST00000493727 PPCDCQ96CD2 204 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 PEX11GQ96HA9 241 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 EGLN2Q96KS0 407 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 AGAP4Q96P64 663 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 WDR77Q9BQA1 342 aaPredicted RBP11.34□□□□□ -0.59
UPF3A-210ENST00000493727 ZNF385DQ9H6B1 395 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 REEP4Q9H6H4 257 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 ASF1BQ9NVP2 202 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 SH3BP4Q9P0V3 963 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 FBXL4Q9UKA2 621 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 SLC5A6Q9Y289 635 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 ATG4BQ9Y4P1 393 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 ASB4Q9Y574 426 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 PKDREJQ9NTG1 2253 aa11.34□□□□□ -0.59
UPF3A-210ENST00000493727 CCDC168Q8NDH2 2452 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 PDZD2O15018 2839 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 A0A1W2PR48 441 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 C1orf226A1L170 272 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 FAM234BA2RU67 622 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 ANKUB1A6NFN9 424 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 GLOD5A6NK44 160 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 GSC2O15499 205 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 PROM1O43490 865 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 PRKRAO75569 313 aaKnown RBP11.33□□□□□ -0.6
UPF3A-210ENST00000493727 RAB6AP20340 208 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 DDCP20711 480 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 IL10P22301 178 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 ADSLP30566 484 aaPredicted RBP11.33□□□□□ -0.6
UPF3A-210ENST00000493727 S100A3P33764 101 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 XCR1P46094 333 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 MRPL19P49406 292 aaKnown RBP11.33□□□□□ -0.6
UPF3A-210ENST00000493727 POLR2JP52435 117 aaKnown RBP11.33□□□□□ -0.6
UPF3A-210ENST00000493727 OCA2Q04671 838 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 DPY19L1Q2PZI1 675 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 CPTPQ5TA50 214 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 OR52E8Q6IFG1 317 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 ANKRD26P1Q6NSI1 321 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 SEZ6L2Q6UXD5 910 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 GK5Q6ZS86 529 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 CLNKQ7Z7G1 428 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 MMP21Q8N119 569 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 CISD2Q8N5K1 135 aaKnown RBP11.33□□□□□ -0.6
UPF3A-210ENST00000493727 EXOSC8Q96B26 276 aaKnown RBP11.33□□□□□ -0.6
UPF3A-210ENST00000493727 KLHL29Q96CT2 875 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 C5orf34Q96MH7 638 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 CSF3RQ99062 836 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 BARD1Q99728 777 aaKnown RBP11.33□□□□□ -0.6
UPF3A-210ENST00000493727 CCDC106Q9BWC9 280 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 EPS8L2Q9H6S3 715 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 RPF2Q9H7B2 306 aaKnown RBP11.33□□□□□ -0.6
UPF3A-210ENST00000493727 MKKSQ9NPJ1 570 aaPredicted RBP11.33□□□□□ -0.6
UPF3A-210ENST00000493727 GIMAP4Q9NUV9 329 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 ATAD3AQ9NVI7 634 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 ENTPD4Q9Y227 616 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 PCDHA9Q9Y5H5 950 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 HS3ST3B1Q9Y662 390 aa11.33□□□□□ -0.6
UPF3A-210ENST00000493727 CCDC154A6NI56 674 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 VSTM2BA6NLU5 285 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 CLDN4O14493 209 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 PCDH17O14917 1159 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 ANKRD28O15084 1053 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 ANGPT2O15123 496 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 B4GALT2O60909 372 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 DNAJB6O75190 326 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 ERAL1O75616 437 aaKnown RBP11.32□□□□□ -0.6
UPF3A-210ENST00000493727 CDC123O75794 336 aaPredicted RBP11.32□□□□□ -0.6
UPF3A-210ENST00000493727 FHP07954 510 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 PPP2R1BP30154 601 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 KIR3DL1P43629 444 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 FAM174BQ3ZCQ3 159 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 MMEL1Q495T6 779 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 MINDY4Q4G0A6 757 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 TIGD2Q4W5G0 525 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 CRB2Q5IJ48 1285 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 B3GNTL1Q67FW5 361 aaPredicted RBP11.32□□□□□ -0.6
UPF3A-210ENST00000493727 C18orf63Q68DL7 685 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 IGFL2Q6UWQ7 119 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 COX15Q7KZN9 410 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 SNX32Q86XE0 403 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 PRSS58Q8IYP2 241 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 FITM2Q8N6M3 262 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 C7orf57Q8NEG2 295 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 OR7A2PQ8NGA2 310 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 TESCQ96BS2 214 aa11.32□□□□□ -0.6
UPF3A-210ENST00000493727 TBC1D20Q96BZ9 403 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms