RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 GATAD2BQ8WXI9 593 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 NCSTNQ92542 709 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 TANKQ92844 425 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 TAMM41Q96BW9 452 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 MUS81Q96NY9 551 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 CD180Q99467 661 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 CCDC3Q9BQI4 270 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 TRIM4Q9C037 500 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 CHRNA10Q9GZZ6 450 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 GLIPR2Q9H4G4 154 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 SIRT3Q9NTG7 399 aaPredicted RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 GPATCH2Q9NW75 528 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 HRASLS2Q9NWW9 162 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 TEX10Q9NXF1 929 aaPredicted RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 KLHL28Q9NXS3 571 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 TMEM9Q9P0T7 183 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 SEC14L3Q9UDX4 400 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 EPHA6Q9UF33 1036 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 APOBEC3BQ9UH17 382 aaKnown RBP9.43□□□□□ -0.9
PRPF3-206ENST00000493553 SLC13A4Q9UKG4 626 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 PILRAQ9UKJ1 303 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 CES1P1Q9UKY3 287 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 SNX5Q9Y5X3 404 aa9.43□□□□□ -0.9
PRPF3-206ENST00000493553 OR5K3A6NET4 321 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 SHISA7A6NL88 538 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 TTC36A6NLP5 189 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 PRR33A8MZF0 331 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 hCG_2039718K7EN88 272 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 SYT5O00445 386 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 PLOD2O00469 737 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 HMGN4O00479 90 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 SLC28A2O43868 658 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 ERAL1O75616 437 aaKnown RBP9.42□□□□□ -0.9
PRPF3-206ENST00000493553 BPNT1O95861 308 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 AK1P00568 194 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 FESP07332 822 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 GNAO1P09471 354 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 SMIM10L1P0DMW3 83 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 POLR2CP19387 275 aaPredicted RBP9.42□□□□□ -0.9
PRPF3-206ENST00000493553 MAGP20916 626 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 MATN1P21941 496 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 EEF1B2P24534 225 aaKnown RBP9.42□□□□□ -0.9
PRPF3-206ENST00000493553 AQP1P29972 269 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 XCR1P46094 333 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 FASLGP48023 281 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 MVKQ03426 396 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 DYNC1I2Q13409 638 aaKnown RBP9.42□□□□□ -0.9
PRPF3-206ENST00000493553 IKZF1Q13422 519 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 UBXN2BQ14CS0 331 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 ZSWIM7Q19AV6 140 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 MICAQ29983 383 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 NADK2Q4G0N4 442 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 IQCCQ4KMZ1 466 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 COLEC12Q5KU26 742 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 WDR45BQ5MNZ6 344 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 C6orf141Q5SZD1 244 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 ZNF691Q5VV52 312 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 FBXO42Q6P3S6 717 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 SLC23A3Q6PIS1 610 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 USP53Q70EK8 1073 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 C11orf74Q86VG3 221 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 TAGAPQ8N103 731 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 HORMAD2Q8N7B1 307 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 TTC29Q8NA56 475 aaPredicted RBP9.42□□□□□ -0.9
PRPF3-206ENST00000493553 TOR1AIP2Q8NFQ8 470 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 OR10G6Q8NH81 332 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 OR5AK3PQ8NH89 298 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 FLVCR1-AS1Q8TAF5 88 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 SLC37A2Q8TED4 501 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 IPCEF1Q8WWN9 437 aaPredicted RBP9.42□□□□□ -0.9
PRPF3-206ENST00000493553 MAL2Q969L2 176 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 TCTN2Q96GX1 697 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 SMIM10Q96HG1 83 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 TMEM19Q96HH6 336 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 FBXL20Q96IG2 436 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 MS4A4EQ96PG1 132 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 TRNT1Q96Q11 434 aaKnown RBP9.42□□□□□ -0.9
PRPF3-206ENST00000493553 MAPKAP1Q9BPZ7 522 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 GABARAPL3Q9BY60 117 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 ACTRT3Q9BYD9 372 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 KLHL31Q9H511 634 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 ARMC7Q9H6L4 198 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 SMURF2Q9HAU4 748 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 PAPOLBQ9NRJ5 636 aaKnown RBP9.42□□□□□ -0.9
PRPF3-206ENST00000493553 TRPC4Q9UBN4 977 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 TMEFF2Q9UIK5 374 aaPredicted RBP9.42□□□□□ -0.9
PRPF3-206ENST00000493553 FBXW2Q9UKT8 454 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 POMT2Q9UKY4 750 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 ABCG2Q9UNQ0 655 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 MRPS33Q9Y291 106 aaKnown RBP9.42□□□□□ -0.9
PRPF3-206ENST00000493553 CA5BQ9Y2D0 317 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 ATG4BQ9Y4P1 393 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 GMPPBQ9Y5P6 360 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 LYVE1Q9Y5Y7 322 aa9.42□□□□□ -0.9
PRPF3-206ENST00000493553 NUP214P35658 2090 aaPredicted RBP9.41□□□□□ -0.9
PRPF3-206ENST00000493553 A0A087WV62 115 aa9.41□□□□□ -0.9
PRPF3-206ENST00000493553 SYNDIG1LA6NDD5 238 aa9.41□□□□□ -0.9
PRPF3-206ENST00000493553 CCDC160A6NGH7 325 aa9.41□□□□□ -0.9
PRPF3-206ENST00000493553 TLR4O00206 839 aa9.41□□□□□ -0.9
PRPF3-206ENST00000493553 FAAHO00519 579 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms