RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.8□□□□□ -0.52
CLIP2-209ENST00000493166 KRTCAP2Q8N6L1 136 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 GOLM1Q8NBJ4 401 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 PSD4Q8NDX1 1056 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 FAM13CQ8NE31 585 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 DNAJB8Q8NHS0 232 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 FAR1Q8WVX9 515 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 ELP4Q96EB1 424 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 MAGED4Q96JG8 741 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 LCORQ96JN0 433 aaPredicted RBP11.8□□□□□ -0.52
CLIP2-209ENST00000493166 SGCZQ96LD1 299 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 MAGEB18Q96M61 343 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 BARD1Q99728 777 aaKnown RBP11.8□□□□□ -0.52
CLIP2-209ENST00000493166 DPY30Q9C005 99 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 NXF5Q9H1B4 397 aaKnown RBP11.8□□□□□ -0.52
CLIP2-209ENST00000493166 WDR55Q9H6Y2 383 aaPredicted RBP11.8□□□□□ -0.52
CLIP2-209ENST00000493166 SLCO1B3Q9NPD5 702 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 ACSS1Q9NUB1 689 aaPredicted RBP11.8□□□□□ -0.52
CLIP2-209ENST00000493166 TAS2R9Q9NYW1 312 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 USH1CQ9Y6N9 552 aa11.8□□□□□ -0.52
CLIP2-209ENST00000493166 FRG2CA6NGY1 282 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 PLOD2O00469 737 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 ACOX3O15254 700 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 P04436 131 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 IFI6P09912 130 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 FREM3P0C091 2139 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 LAMP1P11279 417 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 EFNA1P20827 205 aaPredicted RBP11.79□□□□□ -0.52
CLIP2-209ENST00000493166 FRKP42685 505 aaPredicted RBP11.79□□□□□ -0.52
CLIP2-209ENST00000493166 PPICP45877 212 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 MEOX1P50221 254 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 C21orf58P58505 322 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 GPR85P60893 370 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 ZNF155Q12901 538 aaPredicted RBP11.79□□□□□ -0.52
CLIP2-209ENST00000493166 ESPL1Q14674 2120 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 PGS1Q32NB8 556 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 LYPD8Q6UX82 237 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 TMEM64Q6YI46 380 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 SZRD1Q7Z422 152 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 MAVSQ7Z434 540 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 SPATA19Q7Z5L4 167 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 SULF2Q8IWU5 870 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 RIMKLAQ8IXN7 391 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 PRR22Q8IZ63 422 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 OR2L13Q8N349 312 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 CPSF7Q8N684 471 aaKnown RBP11.79□□□□□ -0.52
CLIP2-209ENST00000493166 NATD1Q8N6N6 113 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 GALNT11Q8NCW6 608 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 OR5M3Q8NGP4 307 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 CKAP2Q8WWK9 683 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 NR4A3Q92570 626 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 HSPBAP1Q96EW2 488 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 BTBD9Q96Q07 612 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 FOLH1BQ9HBA9 442 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 MED4Q9NPJ6 270 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 SACM1LQ9NTJ5 587 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 C19orf53Q9UNZ5 99 aaPredicted RBP11.79□□□□□ -0.52
CLIP2-209ENST00000493166 NPFFR2Q9Y5X5 522 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 MYO18BQ8IUG5 2567 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 RELNP78509 3460 aa11.79□□□□□ -0.52
CLIP2-209ENST00000493166 RP1L1Q8IWN7 2480 aaPredicted RBP11.79□□□□□ -0.52
CLIP2-209ENST00000493166 A0A1W2PRB8 838 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 ASPDHA6ND91 283 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 TCP11X1B4DZS4 312 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 G3V3Y1 287 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 UPK1AO00322 258 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 ATP8B1O43520 1251 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 PEX1O43933 1283 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 DIAPH2O60879 1101 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 NME6O75414 186 aaPredicted RBP11.78□□□□□ -0.52
CLIP2-209ENST00000493166 ERN1O75460 977 aaKnown RBP11.78□□□□□ -0.52
CLIP2-209ENST00000493166 WISP1O95388 367 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 ZIC2O95409 532 aaPredicted RBP11.78□□□□□ -0.52
CLIP2-209ENST00000493166 ALDOCP09972 364 aaKnown RBP11.78□□□□□ -0.52
CLIP2-209ENST00000493166 CCL3P10147 92 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 DRD5P21918 477 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 ABCD3P28288 659 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 CDK9P50750 372 aaKnown RBP11.78□□□□□ -0.52
CLIP2-209ENST00000493166 FBXW4P57775 412 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 ALDH6A1Q02252 535 aaKnown RBP11.78□□□□□ -0.52
CLIP2-209ENST00000493166 MLC1Q15049 377 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 RPS6KA2Q15349 733 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 NTRK2Q16620 822 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 SLC9B1Q4ZJI4 515 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 SLC22A10Q63ZE4 541 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 FAM47EQ6ZV65 393 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 CAMKMTQ7Z624 323 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 ARFGAP2Q8N6H7 521 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 POGLUT1Q8NBL1 392 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 OR10G3Q8NGC4 313 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 ACTRT2Q8TDY3 377 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 NUDT8Q8WV74 236 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 COQ8BQ96D53 544 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 MAELQ96JY0 434 aaKnown RBP11.78□□□□□ -0.52
CLIP2-209ENST00000493166 VSTM2LQ96N03 204 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 FRMD6Q96NE9 622 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 DUSP26Q9BV47 211 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 BHLHE41Q9C0J9 482 aaPredicted RBP11.78□□□□□ -0.52
CLIP2-209ENST00000493166 C3orf14Q9HBI5 128 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 AIG1Q9NVV5 245 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms