RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 Q9H8V8 135 aa2.87□□□□□ -1.95
VPS36-205ENST00000492650 PELI2Q9HAT8 420 aa2.87□□□□□ -1.95
VPS36-205ENST00000492650 PHPT1Q9NRX4 125 aaPredicted RBP2.87□□□□□ -1.95
VPS36-205ENST00000492650 AGPAT3Q9NRZ7 376 aa2.87□□□□□ -1.95
VPS36-205ENST00000492650 KLHL28Q9NXS3 571 aa2.87□□□□□ -1.95
VPS36-205ENST00000492650 PKD2L2Q9NZM6 624 aa2.87□□□□□ -1.95
VPS36-205ENST00000492650 TMEM181Q9P2C4 612 aa2.87□□□□□ -1.95
VPS36-205ENST00000492650 ONECUT1Q9UBC0 465 aa2.87□□□□□ -1.95
VPS36-205ENST00000492650 PEF1Q9UBV8 284 aaKnown RBP2.87□□□□□ -1.95
VPS36-205ENST00000492650 PSORS1C1Q9UIG5 152 aa2.87□□□□□ -1.95
VPS36-205ENST00000492650 B9D1Q9UPM9 204 aa2.87□□□□□ -1.95
VPS36-205ENST00000492650 WDR83OSQ9Y284 106 aa2.87□□□□□ -1.95
VPS36-205ENST00000492650 OR10H1Q9Y4A9 318 aa2.87□□□□□ -1.95
VPS36-205ENST00000492650 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.87□□□□□ -1.95
VPS36-205ENST00000492650 ZHX2Q9Y6X8 837 aa2.87□□□□□ -1.95
VPS36-205ENST00000492650 V9GYY5 206 aaPredicted RBP2.87□□□□□ -1.95
VPS36-205ENST00000492650 CUX2O14529 1486 aa2.87□□□□□ -1.95
VPS36-205ENST00000492650 KIF27Q86VH2 1401 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 COL5A2P05997 1499 aaPredicted RBP2.86□□□□□ -1.95
VPS36-205ENST00000492650 IGLV7-46A0A075B6I9 117 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 TRAV26-1A0A087WT03 109 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 TEX13DA0A0J9YY54 714 aaPredicted RBP2.86□□□□□ -1.95
VPS36-205ENST00000492650 LOC100506127A0A0U1RQW1 187 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 BTBD17A6NE02 478 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 M0R296 226 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 SDHDO14521 159 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 CHEK1O14757 476 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 KLF11O14901 512 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 ARPC3O15145 178 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 AKR7A2O43488 359 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 SNX3O60493 162 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 RANBP6O60518 1105 aaKnown RBP2.86□□□□□ -1.95
VPS36-205ENST00000492650 CDH16O75309 829 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 SAP30O75446 220 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 FGFR1OPO95684 399 aaKnown RBP2.86□□□□□ -1.95
VPS36-205ENST00000492650 CSTAP01040 98 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 KRT6AP02538 564 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 RAF1P04049 648 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 EDN1P05305 212 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 PNMTP11086 282 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 ODC1P11926 461 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 NEFHP12036 1026 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 IRF2P14316 349 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 MX1P20591 662 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 SSTR1P30872 391 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 TRIM23P36406 574 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 CRYBB1P53674 252 aaPredicted RBP2.86□□□□□ -1.95
VPS36-205ENST00000492650 NAPAP54920 295 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 NLRP11P59045 1033 aaKnown RBP2.86□□□□□ -1.95
VPS36-205ENST00000492650 HERV-K104P63124 156 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 RPP38P78345 283 aaKnown RBP2.86□□□□□ -1.95
VPS36-205ENST00000492650 CACNG1Q06432 222 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 DRP2Q13474 957 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 CUL1Q13616 776 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 MAPK6Q16659 721 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 MTHFSDQ2M296 383 aaKnown RBP2.86□□□□□ -1.95
VPS36-205ENST00000492650 DCAF4L1Q3SXM0 396 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 Q3ZCU0 254 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 GPAT3Q53EU6 434 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 GRTP1Q5TC63 336 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 PDPK2PQ6A1A2 396 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 ZSCAN25Q6NSZ9 544 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 C11orf63Q6NUN7 778 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 KDM7AQ6ZMT4 941 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 IL17RELQ6ZVW7 336 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 LHFPL4Q7Z7J7 247 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 YRDCQ86U90 279 aaKnown RBP2.86□□□□□ -1.95
VPS36-205ENST00000492650 PAQR7Q86WK9 346 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 FAM114A1Q8IWE2 563 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 ZNF683Q8IZ20 524 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 TDHQ8IZJ6 230 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 CSGALNACT2Q8N6G5 542 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 LINC00469Q8N7U9 141 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 SPATA4Q8NEY3 305 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 TSEN15Q8WW01 171 aaKnown RBP2.86□□□□□ -1.95
VPS36-205ENST00000492650 LIPHQ8WWY8 451 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 PHYHIPQ92561 330 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 GLYATL1Q969I3 302 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 SLC47A1Q96FL8 570 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 COQ2Q96H96 371 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 C8orf76Q96K31 380 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 C7orf34Q96L11 122 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 CASD1Q96PB1 797 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 VPS35Q96QK1 796 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 CITED1Q99966 193 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 BPIFA3Q9BQP9 254 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 LRRC2Q9BYS8 371 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 ZMYND12Q9H0C1 365 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 PARVGQ9HBI0 331 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 SGK2Q9HBY8 427 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 ZFP14Q9HCL3 533 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 LZTFL1Q9NQ48 299 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 UBAP1Q9NZ09 502 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 B3GAT1Q9P2W7 334 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 SEC14L3Q9UDX4 400 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 LRWD1Q9UFC0 647 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 IFT52Q9Y366 437 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 ATG4BQ9Y4P1 393 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 ZMYM6O95789 1325 aa2.86□□□□□ -1.95
VPS36-205ENST00000492650 KIAA1217Q5T5P2 1943 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms