RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	H2AFJ	Q9BTM1	129 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	PINK1	Q9BXM7	581 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	ALOXE3	Q9BYJ1	711 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	LACRT	Q9GZZ8	138 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	PCBD2	Q9H0N5	130 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	RNF122	Q9H9V4	155 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	ETNK1	Q9HBU6	452 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	PRM3	Q9NNZ6	103 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	HIF1AN	Q9NWT6	349 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	WWOX	Q9NZC7	414 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	GALP	Q9UBC7	116 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	VTI1B	Q9UEU0	232 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	MRPS33	Q9Y291	106 aa	Known RBP	4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	EMC9	Q9Y3B6	208 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	GRIP1	Q9Y3R0	1128 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	SPEF1	Q9Y4P9	236 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	COMMD10	Q9Y6G5	202 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	PMF1-BGLAP	U3KQ54	211 aa		4.78	□□□□□ -1.64
SEC13-219	ENST00000492602	HERC2	O95714	4834 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	DNAH1	Q9P2D7	4330 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	LOC105371242	A0A075B767	164 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	SYNDIG1L	A6NDD5	238 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	URAD	A6NGE7	173 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	CAPN14	A8MX76	684 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602		B4DSR2	109 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	TIMM23	O14925	209 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	LILRA1	O75019	489 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	PSIP1	O75475	530 aa	Known RBP	4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	VAPB	O95292	243 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	PLG	P00747	810 aa	Predicted RBP	4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	TCEA1	P23193	301 aa	Known RBP	4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	IL32	P24001	234 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	CDC25B	P30305	580 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	HPD	P32754	393 aa	Predicted RBP	4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	DEK	P35659	375 aa	Known RBP	4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	CASP3	P42574	277 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	RGS4	P49798	205 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	NEK2	P51955	445 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	BTN3A2	P78410	334 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	CHRNB3	Q05901	458 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	RUNX2	Q13950	521 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	CCNI	Q14094	377 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	PON3	Q15166	354 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	ZSWIM7	Q19AV6	140 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	RUSC1-AS1	Q66K80	236 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	PPP4R4	Q6NUP7	873 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	TRIM40	Q6P9F5	258 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	FIGNL1	Q6PIW4	674 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	BRICD5	Q6PL45	260 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	UGT2A3	Q6UWM9	527 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	RAD9B	Q6WBX8	426 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	STK32C	Q86UX6	486 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	C17orf64	Q86WR6	236 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	LMNTD2	Q8IXW0	634 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	ZNF595	Q8IYB9	648 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	LRRC56	Q8IYG6	542 aa	Predicted RBP	4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	OR6K3	Q8NGY3	331 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	SLC35B2	Q8TB61	432 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	C1orf54	Q8WWF1	131 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	C22orf15	Q8WYQ4	148 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	HSD17B8	Q92506	261 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	TMEM186	Q96B77	213 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	FAHD2A	Q96GK7	314 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	PBK	Q96KB5	322 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	TRMO	Q9BU70	441 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	OR2B2	Q9GZK3	357 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	ACTR8	Q9H981	624 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	NTN4	Q9HB63	628 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	FOLH1B	Q9HBA9	442 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	LPAR2	Q9HBW0	351 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	XAB2	Q9HCS7	855 aa	Known RBP	4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	SERHL	Q9NQF3	203 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	CHRAC1	Q9NRG0	131 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	INTS10	Q9NVR2	710 aa	Known RBP	4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	TAS2R10	Q9NYW0	307 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	KLHL42	Q9P2K6	505 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	CLEC4A	Q9UMR7	237 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	TCAF1	Q9Y4C2	921 aa		4.77	□□□□□ -1.65
SEC13-219	ENST00000492602	TENM2	Q9NT68	2774 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.76	□□□□□ -1.65
SEC13-219	ENST00000492602		A0A0G2JN53	185 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	GOLGA8K	D6RF30	607 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602		H0YC42	278 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	GOLGA8T	H3BQL2	631 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	SEC14L5	O43304	696 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	ZSCAN12	O43309	604 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	CTNS	O60931	367 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	NIPSNAP2	O75323	286 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	H2AFY	O75367	372 aa	Known RBP	4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	CBR3	O75828	277 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	SNUPN	O95149	360 aa	Known RBP	4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	TTC4	O95801	387 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	KNG1	P01042	644 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	FGG	P02679	453 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	TACSTD2	P09758	323 aa		4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms